Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.34■■□□□ 1.33
TRIML1Q8N9V2 AC008764.7-201ENST00000593779 1081 ntBASIC23.34■■□□□ 1.33
TRIML1Q8N9V2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TRIML1Q8N9V2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 GABARAPL3-202ENST00000624044 1851 ntBASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 AC099791.1-201ENST00000416440 715 ntBASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.33■■□□□ 1.33
TRIML1Q8N9V2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TRIML1Q8N9V2 BX005040.4-201ENST00000637145 1518 ntBASIC23.33■■□□□ 1.32
TRIML1Q8N9V2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 PBX2P1-201ENST00000493219 1291 ntBASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 TSPY26P-201ENST00000476365 1326 ntBASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
TRIML1Q8N9V2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 AC121338.2-201ENST00000622535 1744 ntBASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 AP005212.1-201ENST00000581547 1997 ntBASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TRIML1Q8N9V2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 AC106739.1-201ENST00000617035 715 ntBASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TRIML1Q8N9V2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
TRIML1Q8N9V2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 EDA-201ENST00000338901 1233 ntBASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 MIR572-201ENST00000384983 95 ntBASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TRIML1Q8N9V2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC23.27■■□□□ 1.32
TRIML1Q8N9V2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms