Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 AC104564.3-201ENST00000582367 638 ntBASIC21.48■■□□□ 1.03
PAF1Q8N7H5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 EP400NL-214ENST00000641289 2402 ntBASIC21.47■■□□□ 1.03
PAF1Q8N7H5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PAF1Q8N7H5 AC004854.2-201ENST00000608450 1441 ntBASIC21.46■■□□□ 1.03
PAF1Q8N7H5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PAF1Q8N7H5 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
PAF1Q8N7H5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 KRT19P1-201ENST00000405746 1186 ntBASIC21.45■■□□□ 1.02
PAF1Q8N7H5 AC016769.1-201ENST00000409132 1010 ntBASIC21.45■■□□□ 1.02
PAF1Q8N7H5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 C11orf96-202ENST00000528572 1834 ntBASIC21.45■■□□□ 1.02
PAF1Q8N7H5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PAF1Q8N7H5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 AC104187.1-201ENST00000607510 612 ntBASIC21.44■■□□□ 1.02
PAF1Q8N7H5 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PAF1Q8N7H5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 AC137761.2-201ENST00000561729 223 ntBASIC21.43■■□□□ 1.02
PAF1Q8N7H5 AC145350.3-201ENST00000569033 163 ntBASIC21.43■■□□□ 1.02
PAF1Q8N7H5 AC092666.2-201ENST00000613287 246 ntBASIC21.43■■□□□ 1.02
PAF1Q8N7H5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.43■■□□□ 1.02
PAF1Q8N7H5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms