Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 AL024507.2-201ENST00000606070 2574 ntBASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 SLC7A5P1-201ENST00000568957 537 ntBASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 AC120498.10-201ENST00000621827 505 ntBASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 AC073111.5-205ENST00000641717 521 ntBASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDH20Q8N6Y1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.4■■□□□ 1.02
PCDH20Q8N6Y1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.39■■□□□ 1.02
PCDH20Q8N6Y1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH20Q8N6Y1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDH20Q8N6Y1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.39■■□□□ 1.01
PCDH20Q8N6Y1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 CDCA4P2-201ENST00000441182 718 ntBASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 SLC7A5P2-201ENST00000553010 536 ntBASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDH20Q8N6Y1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 RAP2CP1-201ENST00000605103 478 ntBASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCDH20Q8N6Y1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 KRT16P2-201ENST00000414673 1423 ntBASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCDH20Q8N6Y1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCDH20Q8N6Y1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms