Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 LINC00565-201ENST00000562710 2331 ntBASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
C11orf42Q8N5U0 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 AC053503.5-201ENST00000601508 636 ntBASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C11orf42Q8N5U0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C11orf42Q8N5U0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
C11orf42Q8N5U0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C11orf42Q8N5U0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C11orf42Q8N5U0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.38■□□□□ 0.37
C11orf42Q8N5U0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 FBXW4P1-201ENST00000426721 2239 ntBASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 AC104187.1-201ENST00000607510 612 ntBASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C11orf42Q8N5U0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 AC138932.1-201ENST00000534164 6830 ntBASIC17.36■□□□□ 0.37
C11orf42Q8N5U0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms