Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
COL27A1Q8IZC6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 AC007322.3-201ENST00000426526 701 ntBASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 AC008550.1-201ENST00000511500 884 ntBASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 AP006294.2-201ENST00000641667 209 ntBASIC19.96■□□□□ 0.79
COL27A1Q8IZC6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 AC068473.5-201ENST00000616428 2072 ntBASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 LSM12P1-201ENST00000411836 588 ntBASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.95■□□□□ 0.78
COL27A1Q8IZC6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.94■□□□□ 0.78
COL27A1Q8IZC6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COL27A1Q8IZC6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 MCRIP2P1-201ENST00000394346 511 ntBASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 FAM99A-202ENST00000538190 1989 ntBASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 AC080038.3-201ENST00000623346 1952 ntBASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 AC010542.4-201ENST00000563151 1910 ntBASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 AC245052.3-201ENST00000450182 901 ntBASIC19.92■□□□□ 0.78
COL27A1Q8IZC6 RPS2P4-201ENST00000476944 856 ntBASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms