Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 AC137761.2-201ENST00000561729 223 ntBASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 AC145350.3-201ENST00000569033 163 ntBASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.07■■□□□ 1.12
SCUBE3Q8IX30 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 AL024507.2-201ENST00000606070 2574 ntBASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SCUBE3Q8IX30 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 KRT18P20-201ENST00000548986 1279 ntBASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 UBE2DNL-204ENST00000602536 740 ntBASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 AF106564.1-201ENST00000607058 2553 ntBASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SCUBE3Q8IX30 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 IKBKGP1-201ENST00000612193 1073 ntBASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 FEM1AP4-201ENST00000443167 1987 ntBASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SCUBE3Q8IX30 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SCUBE3Q8IX30 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 AC016769.1-201ENST00000409132 1010 ntBASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 AL137784.2-201ENST00000607332 1000 ntBASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 AC120498.10-201ENST00000621827 505 ntBASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SCUBE3Q8IX30 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SCUBE3Q8IX30 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.11
SCUBE3Q8IX30 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 AL137060.1-201ENST00000618151 2648 ntBASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 KRT16P2-201ENST00000414673 1423 ntBASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SCUBE3Q8IX30 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms