Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NUDCD3Q8IVD9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 AC092171.4-201ENST00000609130 632 ntBASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NUDCD3Q8IVD9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NUDCD3Q8IVD9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
NUDCD3Q8IVD9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.77■□□□□ 0.91
NUDCD3Q8IVD9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NUDCD3Q8IVD9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 AP006587.3-201ENST00000525742 1516 ntBASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.75■□□□□ 0.91
NUDCD3Q8IVD9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 SRD5A1P1-201ENST00000442297 786 ntBASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
NUDCD3Q8IVD9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NUDCD3Q8IVD9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 AL391422.3-201ENST00000603791 2761 ntBASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
NUDCD3Q8IVD9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms