Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 AP005435.1-201ENST00000529293 1178 ntBASIC22.61■■□□□ 1.21
TMEM139Q8IV31 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TMEM139Q8IV31 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.6■■□□□ 1.21
TMEM139Q8IV31 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 SLC47A1P1-202ENST00000449666 945 ntBASIC22.59■■□□□ 1.21
TMEM139Q8IV31 MIR3621-201ENST00000580529 85 ntBASIC22.59■■□□□ 1.21
TMEM139Q8IV31 AL512631.2-201ENST00000604634 923 ntBASIC22.59■■□□□ 1.21
TMEM139Q8IV31 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.59■■□□□ 1.21
TMEM139Q8IV31 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 KRT16P3-201ENST00000439127 1283 ntBASIC22.58■■□□□ 1.21
TMEM139Q8IV31 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TMEM139Q8IV31 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TMEM139Q8IV31 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 AC099778.1-201ENST00000568593 1911 ntBASIC22.57■■□□□ 1.2
TMEM139Q8IV31 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.57■■□□□ 1.2
TMEM139Q8IV31 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TMEM139Q8IV31 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 SERBP1P1-201ENST00000396021 1160 ntBASIC22.56■■□□□ 1.2
TMEM139Q8IV31 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TMEM139Q8IV31 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM139Q8IV31 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM139Q8IV31 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM139Q8IV31 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM139Q8IV31 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TMEM139Q8IV31 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.55■■□□□ 1.2
TMEM139Q8IV31 SMUG1P1-201ENST00000590640 811 ntBASIC22.55■■□□□ 1.2
TMEM139Q8IV31 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
TMEM139Q8IV31 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms