Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPAS4Q8IUM7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 AC073648.6-201ENST00000641589 218 ntBASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAS4Q8IUM7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPAS4Q8IUM7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 MCRIP2P1-201ENST00000394346 511 ntBASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 AC060766.5-201ENST00000590539 871 ntBASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 AL589743.5-201ENST00000616611 1050 ntBASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 HLA-B-256ENST00000639848 1089 ntBASIC22.58■■□□□ 1.21
NPAS4Q8IUM7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NPAS4Q8IUM7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.58■■□□□ 1.2
NPAS4Q8IUM7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
NPAS4Q8IUM7 AC127496.7-201ENST00000625110 1798 ntBASIC22.58■■□□□ 1.2
NPAS4Q8IUM7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
NPAS4Q8IUM7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 AC080038.3-201ENST00000623346 1952 ntBASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 AC026471.6-201ENST00000622954 1905 ntBASIC22.57■■□□□ 1.2
NPAS4Q8IUM7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
NPAS4Q8IUM7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 C11orf96-202ENST00000528572 1834 ntBASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.55■■□□□ 1.2
NPAS4Q8IUM7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.54■■□□□ 1.2
NPAS4Q8IUM7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms