Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZC3HC1Q86WB0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZC3HC1Q86WB0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.85■□□□□ 0.93
ZC3HC1Q86WB0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 AC006128.1-201ENST00000624704 1661 ntBASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZC3HC1Q86WB0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 FEM1AP1-201ENST00000431297 1995 ntBASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZC3HC1Q86WB0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZC3HC1Q86WB0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZC3HC1Q86WB0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 EEF1DP3-203ENST00000566025 782 ntBASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 TPRG1LP1-201ENST00000598702 760 ntBASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 LINC01006-201ENST00000333319 2292 ntBASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZC3HC1Q86WB0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 AC053503.5-201ENST00000601508 636 ntBASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 AL139246.5-201ENST00000606645 996 ntBASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 AL354811.1-201ENST00000610286 706 ntBASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZC3HC1Q86WB0 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ZC3HC1Q86WB0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms