Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 IGHV3-19-201ENST00000521488 291 ntBASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MRPL55Q7Z7F7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 SMUG1P1-201ENST00000590640 811 ntBASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 AF106564.1-201ENST00000607058 2553 ntBASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.42□□□□□ -0.26
MRPL55Q7Z7F7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 AC027682.1-201ENST00000562846 899 ntBASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 AC008764.7-201ENST00000593779 1081 ntBASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
MRPL55Q7Z7F7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 AC133561.4-201ENST00000566112 224 ntBASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC13.4□□□□□ -0.26
MRPL55Q7Z7F7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms