Protein–RNA interactions for Protein: Q7Z4N2

TRPM1, Transient receptor potential cation channel subfamily M member 1, humanhuman

Predictions only

Length 1,603 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1Q7Z4N2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC29.68■■■□□ 2.34
TRPM1Q7Z4N2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
TRPM1Q7Z4N2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 AC093787.1-201ENST00000450396 207 ntBASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
TRPM1Q7Z4N2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 AF201337.1-201ENST00000520239 748 ntBASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC29.66■■■□□ 2.34
TRPM1Q7Z4N2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 GPX1P1-201ENST00000388829 606 ntBASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
TRPM1Q7Z4N2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TRPM1Q7Z4N2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC29.64■■■□□ 2.34
TRPM1Q7Z4N2 AC245052.3-201ENST00000450182 901 ntBASIC29.64■■■□□ 2.34
TRPM1Q7Z4N2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TRPM1Q7Z4N2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TRPM1Q7Z4N2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
TRPM1Q7Z4N2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
TRPM1Q7Z4N2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC29.63■■■□□ 2.33
TRPM1Q7Z4N2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 AC244015.2-201ENST00000616358 1861 ntBASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 AL138781.1-201ENST00000566567 1274 ntBASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 OR10C1-204ENST00000622521 1039 ntBASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
TRPM1Q7Z4N2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC29.61■■■□□ 2.33
TRPM1Q7Z4N2 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRPM1Q7Z4N2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRPM1Q7Z4N2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC29.61■■■□□ 2.33
TRPM1Q7Z4N2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC29.61■■■□□ 2.33
TRPM1Q7Z4N2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
TRPM1Q7Z4N2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
TRPM1Q7Z4N2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC29.6■■■□□ 2.33
TRPM1Q7Z4N2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TRPM1Q7Z4N2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRPM1Q7Z4N2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TRPM1Q7Z4N2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TRPM1Q7Z4N2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRPM1Q7Z4N2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
TRPM1Q7Z4N2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
TRPM1Q7Z4N2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC29.58■■■□□ 2.33
TRPM1Q7Z4N2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC29.58■■■□□ 2.33
TRPM1Q7Z4N2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
TRPM1Q7Z4N2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC29.58■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms