Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 AC126544.1-201ENST00000580842 1059 ntBASIC19.23■□□□□ 0.67
TUBA1AQ71U36 CA15P2-201ENST00000611168 834 ntBASIC19.23■□□□□ 0.67
TUBA1AQ71U36 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TUBA1AQ71U36 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.22■□□□□ 0.67
TUBA1AQ71U36 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TUBA1AQ71U36 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 AC091305.1-201ENST00000479476 895 ntBASIC19.21■□□□□ 0.67
TUBA1AQ71U36 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TUBA1AQ71U36 RASA4CP-201ENST00000424092 1398 ntBASIC19.2■□□□□ 0.66
TUBA1AQ71U36 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 AC105265.2-201ENST00000467189 838 ntBASIC19.2■□□□□ 0.66
TUBA1AQ71U36 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1AQ71U36 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TUBA1AQ71U36 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TUBA1AQ71U36 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms