Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SHC4Q6S5L8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.69■■□□□ 1.38
SHC4Q6S5L8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
SHC4Q6S5L8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 AC053503.5-201ENST00000601508 636 ntBASIC23.68■■□□□ 1.38
SHC4Q6S5L8 AC005837.3-201ENST00000612163 286 ntBASIC23.68■■□□□ 1.38
SHC4Q6S5L8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 FEM1AP1-201ENST00000431297 1995 ntBASIC23.68■■□□□ 1.38
SHC4Q6S5L8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SHC4Q6S5L8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 AC006128.1-201ENST00000624704 1661 ntBASIC23.67■■□□□ 1.38
SHC4Q6S5L8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.67■■□□□ 1.38
SHC4Q6S5L8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 LINC01006-201ENST00000333319 2292 ntBASIC23.66■■□□□ 1.38
SHC4Q6S5L8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SHC4Q6S5L8 AC061975.6-201ENST00000579045 1553 ntBASIC23.65■■□□□ 1.38
SHC4Q6S5L8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 AL358852.1-201ENST00000623174 1268 ntBASIC23.65■■□□□ 1.38
SHC4Q6S5L8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SHC4Q6S5L8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SHC4Q6S5L8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.64■■□□□ 1.38
SHC4Q6S5L8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
SHC4Q6S5L8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SHC4Q6S5L8 LINC01521-201ENST00000504184 1943 ntBASIC23.64■■□□□ 1.37
SHC4Q6S5L8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
SHC4Q6S5L8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.64■■□□□ 1.37
SHC4Q6S5L8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHC4Q6S5L8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms