Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXR1Q6PIV2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 MIR3181-201ENST00000578512 73 ntBASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXR1Q6PIV2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FOXR1Q6PIV2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FOXR1Q6PIV2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 BX842568.3-201ENST00000418104 571 ntBASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FOXR1Q6PIV2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 AC026471.1-201ENST00000564629 3026 ntBASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.65■■□□□ 1.06
FOXR1Q6PIV2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms