Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC066615.1-201ENST00000640911 628 ntBASIC21.94■■□□□ 1.1
RNF43Q68DV7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RNF43Q68DV7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RNF43Q68DV7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.94■■□□□ 1.1
RNF43Q68DV7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF43Q68DV7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF43Q68DV7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF43Q68DV7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF43Q68DV7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF43Q68DV7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF43Q68DV7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF43Q68DV7 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF43Q68DV7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
RNF43Q68DV7 EEF1DP3-203ENST00000566025 782 ntBASIC21.93■■□□□ 1.1
RNF43Q68DV7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.93■■□□□ 1.1
RNF43Q68DV7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF43Q68DV7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RNF43Q68DV7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF43Q68DV7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 CROCCP5-201ENST00000436658 830 ntBASIC21.92■■□□□ 1.1
RNF43Q68DV7 CD99P1-205ENST00000527459 561 ntBASIC21.92■■□□□ 1.1
RNF43Q68DV7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF43Q68DV7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.92■■□□□ 1.1
RNF43Q68DV7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RNF43Q68DV7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.92■■□□□ 1.1
RNF43Q68DV7 FAM99A-202ENST00000538190 1989 ntBASIC21.92■■□□□ 1.1
RNF43Q68DV7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF43Q68DV7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF43Q68DV7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
RNF43Q68DV7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
RNF43Q68DV7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 NCF1B-203ENST00000435988 1254 ntBASIC21.9■■□□□ 1.1
RNF43Q68DV7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.9■■□□□ 1.1
RNF43Q68DV7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.9■■□□□ 1.1
RNF43Q68DV7 AC138907.5-202ENST00000569484 235 ntBASIC21.9■■□□□ 1.1
RNF43Q68DV7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF43Q68DV7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF43Q68DV7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF43Q68DV7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF43Q68DV7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.89■■□□□ 1.1
RNF43Q68DV7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.89■■□□□ 1.1
RNF43Q68DV7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RNF43Q68DV7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF43Q68DV7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF43Q68DV7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF43Q68DV7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF43Q68DV7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF43Q68DV7 KRT18P11-201ENST00000435214 1283 ntBASIC21.89■■□□□ 1.09
RNF43Q68DV7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.89■■□□□ 1.09
RNF43Q68DV7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF43Q68DV7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF43Q68DV7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
RNF43Q68DV7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF43Q68DV7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF43Q68DV7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF43Q68DV7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RNF43Q68DV7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF43Q68DV7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms