Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 SNORA78-201ENST00000459373 127 ntBASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VPS13DQ5THJ4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 AC139530.1-201ENST00000575312 1977 ntBASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC14.23□□□□□ -0.13
VPS13DQ5THJ4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 AC008175.2-201ENST00000612840 297 ntBASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 RPS2P4-201ENST00000476944 856 ntBASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 PNMA6B-201ENST00000538162 1200 ntBASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 FAM21FP-204ENST00000608637 956 ntBASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
VPS13DQ5THJ4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.21□□□□□ -0.13
VPS13DQ5THJ4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms