Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF1Q5TC12 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 AC105265.2-201ENST00000467189 838 ntBASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
ATPAF1Q5TC12 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATPAF1Q5TC12 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATPAF1Q5TC12 IRS3P-201ENST00000223076 1006 ntBASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATPAF1Q5TC12 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATPAF1Q5TC12 OR7E47P-201ENST00000546390 1422 ntBASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.06■□□□□ 0.48
ATPAF1Q5TC12 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms