Protein–RNA interactions for Protein: Q15012

LAPTM4A, Lysosomal-associated transmembrane protein 4A, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4AQ15012 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 RNF165-205ENST00000588679 2904 ntBASIC19.46■□□□□ 0.71
LAPTM4AQ15012 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 AC131281.2-201ENST00000520478 145 ntBASIC19.46■□□□□ 0.71
LAPTM4AQ15012 AC087239.1-201ENST00000622671 572 ntBASIC19.46■□□□□ 0.71
LAPTM4AQ15012 AC068587.7-201ENST00000641602 218 ntBASIC19.46■□□□□ 0.71
LAPTM4AQ15012 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 AP005212.1-201ENST00000581547 1997 ntBASIC19.46■□□□□ 0.71
LAPTM4AQ15012 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 AP004607.7-201ENST00000527152 1677 ntBASIC19.46■□□□□ 0.71
LAPTM4AQ15012 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LAPTM4AQ15012 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 DUX4L19-201ENST00000557448 1267 ntBASIC19.45■□□□□ 0.7
LAPTM4AQ15012 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
LAPTM4AQ15012 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 AC007952.6-201ENST00000573168 2673 ntBASIC19.44■□□□□ 0.7
LAPTM4AQ15012 AC003957.1-201ENST00000625108 2673 ntBASIC19.44■□□□□ 0.7
LAPTM4AQ15012 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LAPTM4AQ15012 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 AL138724.1-201ENST00000606771 1088 ntBASIC19.43■□□□□ 0.7
LAPTM4AQ15012 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 AC006128.1-201ENST00000624704 1661 ntBASIC19.43■□□□□ 0.7
LAPTM4AQ15012 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LAPTM4AQ15012 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LAPTM4AQ15012 GABARAPL3-202ENST00000624044 1851 ntBASIC19.41■□□□□ 0.7
LAPTM4AQ15012 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LAPTM4AQ15012 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms