Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 FIR1YER032W 2631 nt2.44□□□□□ -2.02
SDO1Q07953 ORC2YBR060C 1863 nt2.43□□□□□ -2.02
SDO1Q07953 BIT61YJL058C 1632 nt2.43□□□□□ -2.02
SDO1Q07953 YBT1YLL048C 4986 nt2.43□□□□□ -2.02
SDO1Q07953 DSE1YER124C 1722 nt2.43□□□□□ -2.02
SDO1Q07953 HOP1YIL072W 1818 nt2.43□□□□□ -2.02
SDO1Q07953 TFB1YDR311W 1929 nt2.43□□□□□ -2.02
SDO1Q07953 YDR124WYDR124W 975 nt2.43□□□□□ -2.02
SDO1Q07953 DSE2YHR143W 978 nt2.43□□□□□ -2.02
SDO1Q07953 YHR213WYHR213W 597 nt2.43□□□□□ -2.02
SDO1Q07953 SGM1YJR134C 2124 nt2.43□□□□□ -2.02
SDO1Q07953 YAR062WYAR062W 597 nt2.43□□□□□ -2.02
SDO1Q07953 NMA111YNL123W 2994 nt2.43□□□□□ -2.02
SDO1Q07953 PHO2YDL106C 1680 nt2.43□□□□□ -2.02
SDO1Q07953 YEF3YLR249W 3135 nt2.43□□□□□ -2.02
SDO1Q07953 GCV2YMR189W 3105 nt2.43□□□□□ -2.02
SDO1Q07953 AKR1YDR264C 2295 nt2.43□□□□□ -2.02
SDO1Q07953 TIM11YDR322C-A 291 nt2.42□□□□□ -2.02
SDO1Q07953 THP2YHR167W 786 nt2.42□□□□□ -2.02
SDO1Q07953 PPX1YHR201C 1194 nt2.42□□□□□ -2.02
SDO1Q07953 HOT13YKL084W 351 nt2.42□□□□□ -2.02
SDO1Q07953 RPL8BYLL045C 771 nt2.42□□□□□ -2.02
SDO1Q07953 PML39YML107C 1005 nt2.42□□□□□ -2.02
SDO1Q07953 YBR085C-AYBR085C-A 258 nt2.42□□□□□ -2.02
SDO1Q07953 SAK1YER129W 3429 nt2.42□□□□□ -2.02
SDO1Q07953 YPL216WYPL216W 3309 nt2.42□□□□□ -2.02
SDO1Q07953 MDM36YPR083W 1740 nt2.42□□□□□ -2.02
SDO1Q07953 SAD1YFR005C 1347 nt2.42□□□□□ -2.02
SDO1Q07953 DBF20YPR111W 1695 nt2.41□□□□□ -2.02
SDO1Q07953 YOR296WYOR296W 3870 nt2.41□□□□□ -2.02
SDO1Q07953 MDM10YAL010C 1482 nt2.41□□□□□ -2.02
SDO1Q07953 SIR3YLR442C 2937 nt2.41□□□□□ -2.02
SDO1Q07953 IRA2YOL081W 9240 nt2.41□□□□□ -2.02
SDO1Q07953 YCR045W-AYCR045W-A 351 nt2.41□□□□□ -2.02
SDO1Q07953 YDR336WYDR336W 945 nt2.41□□□□□ -2.02
SDO1Q07953 tK(UUU)DtK(UUU)D 73 nt2.41□□□□□ -2.02
SDO1Q07953 tK(UUU)G1tK(UUU)G1 73 nt2.41□□□□□ -2.02
SDO1Q07953 tK(UUU)G2tK(UUU)G2 73 nt2.41□□□□□ -2.02
SDO1Q07953 tK(UUU)KtK(UUU)K 73 nt2.41□□□□□ -2.02
SDO1Q07953 tK(UUU)LtK(UUU)L 73 nt2.41□□□□□ -2.02
SDO1Q07953 tK(UUU)OtK(UUU)O 73 nt2.41□□□□□ -2.02
SDO1Q07953 tK(UUU)PtK(UUU)P 73 nt2.41□□□□□ -2.02
SDO1Q07953 ERV1YGR029W 570 nt2.41□□□□□ -2.02
SDO1Q07953 YAL031W-AYAL031W-A 309 nt2.41□□□□□ -2.02
SDO1Q07953 LIP2YLR239C 987 nt2.41□□□□□ -2.02
SDO1Q07953 RPS1AYLR441C 768 nt2.41□□□□□ -2.02
SDO1Q07953 GAB1YLR459W 1185 nt2.41□□□□□ -2.02
SDO1Q07953 SRT1YMR101C 1032 nt2.41□□□□□ -2.02
SDO1Q07953 YOL118CYOL118C 309 nt2.41□□□□□ -2.02
SDO1Q07953 snR35snR35 204 nt2.41□□□□□ -2.02
SDO1Q07953 YLR001CYLR001C 2589 nt2.41□□□□□ -2.02
SDO1Q07953 SYO1YDL063C 1863 nt2.4□□□□□ -2.03
SDO1Q07953 RGI1YER067W 486 nt2.4□□□□□ -2.03
SDO1Q07953 YHR212CYHR212C 336 nt2.4□□□□□ -2.03
SDO1Q07953 ATG27YJL178C 816 nt2.4□□□□□ -2.03
SDO1Q07953 YJR056CYJR056C 711 nt2.4□□□□□ -2.03
SDO1Q07953 YKR033CYKR033C 426 nt2.4□□□□□ -2.03
SDO1Q07953 YAR060CYAR060C 336 nt2.4□□□□□ -2.03
SDO1Q07953 DLT1YMR126C 1029 nt2.4□□□□□ -2.03
SDO1Q07953 YBL055CYBL055C 1257 nt2.4□□□□□ -2.03
SDO1Q07953 IMP4YNL075W 873 nt2.4□□□□□ -2.03
SDO1Q07953 ICS2YBR157C 768 nt2.4□□□□□ -2.03
SDO1Q07953 ILS1YBL076C 3219 nt2.4□□□□□ -2.03
SDO1Q07953 YDR133CYDR133C 336 nt2.39□□□□□ -2.03
SDO1Q07953 CPR5YDR304C 678 nt2.39□□□□□ -2.03
SDO1Q07953 EMI1YDR512C 564 nt2.39□□□□□ -2.03
SDO1Q07953 SPT15YER148W 723 nt2.39□□□□□ -2.03
SDO1Q07953 PDS5YMR076C 3834 nt2.39□□□□□ -2.03
SDO1Q07953 AIM36YMR157C 768 nt2.39□□□□□ -2.03
SDO1Q07953 YOL134CYOL134C 390 nt2.39□□□□□ -2.03
SDO1Q07953 RPL33AYPL143W 324 nt2.39□□□□□ -2.03
SDO1Q07953 FAR11YNL127W 2862 nt2.39□□□□□ -2.03
SDO1Q07953 AXL1YPR122W 3627 nt2.38□□□□□ -2.03
SDO1Q07953 YPD1YDL235C 504 nt2.38□□□□□ -2.03
SDO1Q07953 AGE1YDR524C 1449 nt2.38□□□□□ -2.03
SDO1Q07953 VEL1YGL258W 621 nt2.38□□□□□ -2.03
SDO1Q07953 RPL24BYGR148C 468 nt2.38□□□□□ -2.03
SDO1Q07953 OTU2YHL013C 924 nt2.38□□□□□ -2.03
SDO1Q07953 YIL068W-AYIL068W-A 384 nt2.38□□□□□ -2.03
SDO1Q07953 YIR036W-AYIR036W-A 402 nt2.38□□□□□ -2.03
SDO1Q07953 ERG20YJL167W 1059 nt2.38□□□□□ -2.03
SDO1Q07953 ANR2YKL047W 1551 nt2.38□□□□□ -2.03
SDO1Q07953 YLL047WYLL047W 384 nt2.38□□□□□ -2.03
SDO1Q07953 HFD1YMR110C 1599 nt2.38□□□□□ -2.03
SDO1Q07953 YNL234WYNL234W 1281 nt2.38□□□□□ -2.03
SDO1Q07953 EDS1YBR033W 2760 nt2.38□□□□□ -2.03
SDO1Q07953 TRM2YKR056W 1920 nt2.38□□□□□ -2.03
SDO1Q07953 ARK1YNL020C 1917 nt2.38□□□□□ -2.03
SDO1Q07953 YDR170W-AYDR170W-A 1323 nt2.38□□□□□ -2.03
SDO1Q07953 YBL005W-AYBL005W-A 1323 nt2.38□□□□□ -2.03
SDO1Q07953 YMR046CYMR046C 1323 nt2.38□□□□□ -2.03
SDO1Q07953 YNL284C-AYNL284C-A 1323 nt2.38□□□□□ -2.03
SDO1Q07953 TOR1YJR066W 7413 nt2.38□□□□□ -2.03
SDO1Q07953 YIL080WYIL080W 4722 nt2.37□□□□□ -2.03
SDO1Q07953 ERT1YBR239C 1590 nt2.37□□□□□ -2.03
SDO1Q07953 OPI6YDL096C 327 nt2.37□□□□□ -2.03
SDO1Q07953 YIP5YGL161C 933 nt2.37□□□□□ -2.03
SDO1Q07953 VMA10YHR039C-A 345 nt2.37□□□□□ -2.03
SDO1Q07953 PPE1YHR075C 1203 nt2.37□□□□□ -2.03
SDO1Q07953 PIR1YKL164C 1026 nt2.37□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms