Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 ART10YLR392C 1557 nt1.31□□□□□ -2.2
VPS13Q07878 TPD3YAL016W 1908 nt1.31□□□□□ -2.2
VPS13Q07878 TVP18YMR071C 504 nt1.31□□□□□ -2.2
VPS13Q07878 STB2YMR053C 2553 nt1.31□□□□□ -2.2
VPS13Q07878 YNL035CYNL035C 1170 nt1.31□□□□□ -2.2
VPS13Q07878 HCH1YNL281W 462 nt1.31□□□□□ -2.2
VPS13Q07878 TSR4YOL022C 1227 nt1.31□□□□□ -2.2
VPS13Q07878 RUD3YOR216C 1455 nt1.3□□□□□ -2.2
VPS13Q07878 YGL176CYGL176C 1665 nt1.3□□□□□ -2.2
VPS13Q07878 SSN8YNL025C 972 nt1.3□□□□□ -2.2
VPS13Q07878 AFT2YPL202C 1251 nt1.3□□□□□ -2.2
VPS13Q07878 EAF1YDR359C 2949 nt1.3□□□□□ -2.2
VPS13Q07878 IST2YBR086C 2841 nt1.3□□□□□ -2.2
VPS13Q07878 YER023C-AYER023C-A 213 nt1.3□□□□□ -2.2
VPS13Q07878 FMP27YLR454W 7887 nt1.29□□□□□ -2.2
VPS13Q07878 SOK1YDR006C 2706 nt1.29□□□□□ -2.2
VPS13Q07878 YCR087C-AYCR087C-A 462 nt1.29□□□□□ -2.2
VPS13Q07878 YGR269WYGR269W 327 nt1.29□□□□□ -2.2
VPS13Q07878 MRPL6YHR147C 645 nt1.29□□□□□ -2.2
VPS13Q07878 YCK2YNL154C 1641 nt1.29□□□□□ -2.2
VPS13Q07878 ESC1YMR219W 4977 nt1.29□□□□□ -2.2
VPS13Q07878 NUP192YJL039C 5052 nt1.29□□□□□ -2.2
VPS13Q07878 TIM9YEL020W-A 264 nt1.29□□□□□ -2.2
VPS13Q07878 AIM39YOL053W 1188 nt1.29□□□□□ -2.2
VPS13Q07878 LHS1YKL073W 2646 nt1.29□□□□□ -2.2
VPS13Q07878 PIP2YOR363C 2991 nt1.29□□□□□ -2.2
VPS13Q07878 ATP17YDR377W 306 nt1.29□□□□□ -2.2
VPS13Q07878 SHE2YKL130C 741 nt1.29□□□□□ -2.2
VPS13Q07878 YKT6YKL196C 603 nt1.28□□□□□ -2.2
VPS13Q07878 CUS2YNL286W 858 nt1.28□□□□□ -2.2
VPS13Q07878 YOR097CYOR097C 528 nt1.28□□□□□ -2.2
VPS13Q07878 DNF3YMR162C 4971 nt1.28□□□□□ -2.2
VPS13Q07878 MGA2YIR033W 3342 nt1.28□□□□□ -2.2
VPS13Q07878 YDR089WYDR089W 2610 nt1.27□□□□□ -2.21
VPS13Q07878 TRA1YHR099W 11235 nt1.27□□□□□ -2.21
VPS13Q07878 SWA2YDR320C 2007 nt1.27□□□□□ -2.21
VPS13Q07878 ERV29YGR284C 933 nt1.27□□□□□ -2.21
VPS13Q07878 SDP1YIL113W 630 nt1.27□□□□□ -2.21
VPS13Q07878 YCR050CYCR050C 309 nt1.26□□□□□ -2.21
VPS13Q07878 YER085CYER085C 522 nt1.26□□□□□ -2.21
VPS13Q07878 YHR086W-AYHR086W-A 162 nt1.26□□□□□ -2.21
VPS13Q07878 RMA1YKL132C 1293 nt1.26□□□□□ -2.21
VPS13Q07878 TAF14YPL129W 735 nt1.26□□□□□ -2.21
VPS13Q07878 VPS72YDR485C 2388 nt1.26□□□□□ -2.21
VPS13Q07878 SLX8YER116C 825 nt1.26□□□□□ -2.21
VPS13Q07878 BAT1YHR208W 1182 nt1.26□□□□□ -2.21
VPS13Q07878 LAA1YJL207C 6045 nt1.26□□□□□ -2.21
VPS13Q07878 ALG2YGL065C 1512 nt1.26□□□□□ -2.21
VPS13Q07878 ULS1YOR191W 4860 nt1.25□□□□□ -2.21
VPS13Q07878 PAM16YJL104W 450 nt1.25□□□□□ -2.21
VPS13Q07878 SBE2YDR351W 2595 nt1.25□□□□□ -2.21
VPS13Q07878 SYH1YPL105C 2550 nt1.25□□□□□ -2.21
VPS13Q07878 snR17asnR17a 333 nt1.25□□□□□ -2.21
VPS13Q07878 UBR2YLR024C 5619 nt1.25□□□□□ -2.21
VPS13Q07878 SCC2YDR180W 4482 nt1.24□□□□□ -2.21
VPS13Q07878 AIM6YDL237W 1173 nt1.24□□□□□ -2.21
VPS13Q07878 YRR1YOR162C 2433 nt1.24□□□□□ -2.21
VPS13Q07878 BNI4YNL233W 2679 nt1.24□□□□□ -2.21
VPS13Q07878 YIL156W-AYIL156W-A 402 nt1.24□□□□□ -2.21
VPS13Q07878 TRZ1YKR079C 2517 nt1.24□□□□□ -2.21
VPS13Q07878 TOF1YNL273W 3717 nt1.24□□□□□ -2.21
VPS13Q07878 SYO1YDL063C 1863 nt1.24□□□□□ -2.21
VPS13Q07878 YLR365WYLR365W 333 nt1.24□□□□□ -2.21
VPS13Q07878 RDS2YPL133C 1341 nt1.23□□□□□ -2.21
VPS13Q07878 PRT1YOR361C 2292 nt1.23□□□□□ -2.21
VPS13Q07878 YNL165WYNL165W 1221 nt1.23□□□□□ -2.21
VPS13Q07878 YDR341CYDR341C 1824 nt1.23□□□□□ -2.21
VPS13Q07878 SEC16YPL085W 6588 nt1.23□□□□□ -2.21
VPS13Q07878 PHO13YDL236W 939 nt1.23□□□□□ -2.21
VPS13Q07878 SVP26YHR181W 687 nt1.23□□□□□ -2.21
VPS13Q07878 EST3YIL009C-A 546 nt1.23□□□□□ -2.21
VPS13Q07878 MOT1YPL082C 5604 nt1.23□□□□□ -2.21
VPS13Q07878 PBY1YBR094W 2262 nt1.23□□□□□ -2.21
VPS13Q07878 BUD3YCL014W 4911 nt1.22□□□□□ -2.21
VPS13Q07878 SEC65YML105C 822 nt1.22□□□□□ -2.21
VPS13Q07878 NSE1YLR007W 1011 nt1.22□□□□□ -2.21
VPS13Q07878 ROM1YGR070W 3468 nt1.22□□□□□ -2.21
VPS13Q07878 MYO2YOR326W 4725 nt1.21□□□□□ -2.22
VPS13Q07878 YDR210W-BYDR210W-B 5313 nt1.21□□□□□ -2.22
VPS13Q07878 YDL162CYDL162C 357 nt1.21□□□□□ -2.22
VPS13Q07878 COS4YFL062W 1140 nt1.21□□□□□ -2.22
VPS13Q07878 COS6YGR295C 1146 nt1.21□□□□□ -2.22
VPS13Q07878 COS1YNL336W 1146 nt1.21□□□□□ -2.22
VPS13Q07878 STH1YIL126W 4080 nt1.21□□□□□ -2.22
VPS13Q07878 SAD1YFR005C 1347 nt1.21□□□□□ -2.22
VPS13Q07878 MRP8YKL142W 660 nt1.21□□□□□ -2.22
VPS13Q07878 SET3YKR029C 2256 nt1.21□□□□□ -2.22
VPS13Q07878 MIC60YKR016W 1623 nt1.2□□□□□ -2.22
VPS13Q07878 YHR182C-AYHR182C-A 474 nt1.2□□□□□ -2.22
VPS13Q07878 SMD3YLR147C 306 nt1.2□□□□□ -2.22
VPS13Q07878 YBL005W-BYBL005W-B 5268 nt1.2□□□□□ -2.22
VPS13Q07878 YMR045CYMR045C 5268 nt1.2□□□□□ -2.22
VPS13Q07878 PRP6YBR055C 2700 nt1.2□□□□□ -2.22
VPS13Q07878 RPS26BYER131W 360 nt1.2□□□□□ -2.22
VPS13Q07878 tQ(UUG)E2tQ(UUG)E2 72 nt1.2□□□□□ -2.22
VPS13Q07878 PSY3YLR376C 729 nt1.2□□□□□ -2.22
VPS13Q07878 DPP1YDR284C 870 nt1.2□□□□□ -2.22
VPS13Q07878 YPT53YNL093W 663 nt1.2□□□□□ -2.22
VPS13Q07878 MPD2YOL088C 834 nt1.2□□□□□ -2.22
VPS13Q07878 EGD1YPL037C 474 nt1.2□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 61.4 ms