Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 snR35snR35 204 nt3.17□□□□□ -1.9
RPA49Q01080 ECM21YBL101C 3354 nt3.17□□□□□ -1.9
RPA49Q01080 UBP8YMR223W 1416 nt3.17□□□□□ -1.9
RPA49Q01080 FUN30YAL019W 3396 nt3.17□□□□□ -1.9
RPA49Q01080 PEX5YDR244W 1839 nt3.16□□□□□ -1.9
RPA49Q01080 LCB4YOR171C 1875 nt3.16□□□□□ -1.9
RPA49Q01080 YDL242WYDL242W 354 nt3.16□□□□□ -1.9
RPA49Q01080 MRH1YDR033W 963 nt3.16□□□□□ -1.9
RPA49Q01080 SDH3YKL141W 597 nt3.16□□□□□ -1.9
RPA49Q01080 YPT6YLR262C 648 nt3.16□□□□□ -1.9
RPA49Q01080 GRX5YPL059W 453 nt3.16□□□□□ -1.9
RPA49Q01080 CSR2YPR030W 3366 nt3.16□□□□□ -1.9
RPA49Q01080 GOS1YHL031C 672 nt3.15□□□□□ -1.91
RPA49Q01080 YHR212CYHR212C 336 nt3.15□□□□□ -1.91
RPA49Q01080 YIL141WYIL141W 390 nt3.15□□□□□ -1.91
RPA49Q01080 DAL2YIR029W 1032 nt3.15□□□□□ -1.91
RPA49Q01080 AIM25YJR100C 984 nt3.15□□□□□ -1.91
RPA49Q01080 YLL037WYLL037W 381 nt3.15□□□□□ -1.91
RPA49Q01080 YAR060CYAR060C 336 nt3.15□□□□□ -1.91
RPA49Q01080 NDL1YLR254C 570 nt3.15□□□□□ -1.91
RPA49Q01080 YNL109WYNL109W 546 nt3.15□□□□□ -1.91
RPA49Q01080 CAT5YOR125C 702 nt3.15□□□□□ -1.91
RPA49Q01080 VPS33YLR396C 2076 nt3.15□□□□□ -1.91
RPA49Q01080 CWH41YGL027C 2502 nt3.15□□□□□ -1.91
RPA49Q01080 YDR034C-DYDR034C-D 5313 nt3.14□□□□□ -1.91
RPA49Q01080 MUB1YMR100W 1863 nt3.14□□□□□ -1.91
RPA49Q01080 YIL169CYIL169C 2988 nt3.14□□□□□ -1.91
RPA49Q01080 YHR214C-EYHR214C-E 300 nt3.14□□□□□ -1.91
RPA49Q01080 YAR070CYAR070C 300 nt3.14□□□□□ -1.91
RPA49Q01080 YDR061WYDR061W 1620 nt3.14□□□□□ -1.91
RPA49Q01080 FLO9YAL063C 3969 nt3.14□□□□□ -1.91
RPA49Q01080 NOP56YLR197W 1515 nt3.14□□□□□ -1.91
RPA49Q01080 ROG1YGL144C 2058 nt3.13□□□□□ -1.91
RPA49Q01080 YPL216WYPL216W 3309 nt3.13□□□□□ -1.91
RPA49Q01080 YGL082WYGL082W 1146 nt3.13□□□□□ -1.91
RPA49Q01080 USE1YGL098W 738 nt3.13□□□□□ -1.91
RPA49Q01080 MRPL9YGR220C 810 nt3.13□□□□□ -1.91
RPA49Q01080 PPX1YHR201C 1194 nt3.13□□□□□ -1.91
RPA49Q01080 YIR040CYIR040C 333 nt3.13□□□□□ -1.91
RPA49Q01080 MBB1YJL199C 327 nt3.13□□□□□ -1.91
RPA49Q01080 YLR050CYLR050C 486 nt3.13□□□□□ -1.91
RPA49Q01080 RPL6AYML073C 531 nt3.13□□□□□ -1.91
RPA49Q01080 URA5YML106W 681 nt3.13□□□□□ -1.91
RPA49Q01080 YBL029C-AYBL029C-A 285 nt3.13□□□□□ -1.91
RPA49Q01080 SUB1YMR039C 879 nt3.13□□□□□ -1.91
RPA49Q01080 RUF5-1RUF5-1 710 nt3.13□□□□□ -1.91
RPA49Q01080 RUF5-2RUF5-2 710 nt3.13□□□□□ -1.91
RPA49Q01080 MPD2YOL088C 834 nt3.13□□□□□ -1.91
RPA49Q01080 MSB2YGR014W 3921 nt3.13□□□□□ -1.91
RPA49Q01080 TFC1YBR123C 1950 nt3.12□□□□□ -1.91
RPA49Q01080 MSH4YFL003C 2637 nt3.12□□□□□ -1.91
RPA49Q01080 EAP1YKL204W 1899 nt3.12□□□□□ -1.91
RPA49Q01080 SLU7YDR088C 1149 nt3.12□□□□□ -1.91
RPA49Q01080 YDR381C-AYDR381C-A 345 nt3.12□□□□□ -1.91
RPA49Q01080 HMF1YER057C 390 nt3.12□□□□□ -1.91
RPA49Q01080 RPL23BYER117W 414 nt3.12□□□□□ -1.91
RPA49Q01080 BTN2YGR142W 1233 nt3.12□□□□□ -1.91
RPA49Q01080 YJL156W-AYJL156W-A 222 nt3.12□□□□□ -1.91
RPA49Q01080 RPL8BYLL045C 771 nt3.12□□□□□ -1.91
RPA49Q01080 SPP382YLR424W 2127 nt3.12□□□□□ -1.91
RPA49Q01080 SMA2YML066C 1110 nt3.12□□□□□ -1.91
RPA49Q01080 YMR141CYMR141C 309 nt3.12□□□□□ -1.91
RPA49Q01080 YBR287WYBR287W 1284 nt3.12□□□□□ -1.91
RPA49Q01080 YDR261W-AYDR261W-A 1317 nt3.12□□□□□ -1.91
RPA49Q01080 ARP5YNL059C 2268 nt3.12□□□□□ -1.91
RPA49Q01080 SSE2YBR169C 2082 nt3.12□□□□□ -1.91
RPA49Q01080 FLO1YAR050W 4614 nt3.12□□□□□ -1.91
RPA49Q01080 GCD6YDR211W 2139 nt3.11□□□□□ -1.91
RPA49Q01080 IOC3YFR013W 2364 nt3.11□□□□□ -1.91
RPA49Q01080 YMR018WYMR018W 1545 nt3.11□□□□□ -1.91
RPA49Q01080 URK1YNR012W 1506 nt3.11□□□□□ -1.91
RPA49Q01080 SLD5YDR489W 885 nt3.11□□□□□ -1.91
RPA49Q01080 RMD6YEL072W 696 nt3.11□□□□□ -1.91
RPA49Q01080 ECO1YFR027W 846 nt3.11□□□□□ -1.91
RPA49Q01080 EFG1YGR271C-A 702 nt3.11□□□□□ -1.91
RPA49Q01080 YKL069WYKL069W 543 nt3.11□□□□□ -1.91
RPA49Q01080 SDO1YLR022C 753 nt3.11□□□□□ -1.91
RPA49Q01080 YLR076CYLR076C 423 nt3.11□□□□□ -1.91
RPA49Q01080 YLR217WYLR217W 324 nt3.11□□□□□ -1.91
RPA49Q01080 YNL089CYNL089C 477 nt3.11□□□□□ -1.91
RPA49Q01080 RPC40YPR110C 1008 nt3.11□□□□□ -1.91
RPA49Q01080 BNI4YNL233W 2679 nt3.11□□□□□ -1.91
RPA49Q01080 ATP22YDR350C 2055 nt3.1□□□□□ -1.91
RPA49Q01080 CDC37YDR168W 1521 nt3.1□□□□□ -1.91
RPA49Q01080 BUD4YJR092W 4344 nt3.1□□□□□ -1.91
RPA49Q01080 snR83snR83 306 nt3.1□□□□□ -1.91
RPA49Q01080 VAB2YEL005C 849 nt3.1□□□□□ -1.91
RPA49Q01080 YFL015CYFL015C 495 nt3.1□□□□□ -1.91
RPA49Q01080 YGR017WYGR017W 894 nt3.1□□□□□ -1.91
RPA49Q01080 YGR283CYGR283C 1026 nt3.1□□□□□ -1.91
RPA49Q01080 YKL070WYKL070W 510 nt3.1□□□□□ -1.91
RPA49Q01080 COA4YLR218C 453 nt3.1□□□□□ -1.91
RPA49Q01080 RPS28BYLR264W 204 nt3.1□□□□□ -1.91
RPA49Q01080 YLR297WYLR297W 390 nt3.1□□□□□ -1.91
RPA49Q01080 PEX27YOR193W 1131 nt3.1□□□□□ -1.91
RPA49Q01080 YPR050CYPR050C 414 nt3.1□□□□□ -1.91
RPA49Q01080 VPS38YLR360W 1320 nt3.1□□□□□ -1.91
RPA49Q01080 EMP70YLR083C 2004 nt3.1□□□□□ -1.91
RPA49Q01080 YAK1YJL141C 2424 nt3.1□□□□□ -1.91
RPA49Q01080 ENA5YDR038C 3276 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 43.7 ms