Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL20P78556 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL20P78556 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.53■□□□□ 0.24
CCL20P78556 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.53■□□□□ 0.24
CCL20P78556 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL20P78556 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL20P78556 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL20P78556 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL20P78556 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCL20P78556 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.53■□□□□ 0.24
CCL20P78556 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CCL20P78556 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL20P78556 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.52■□□□□ 0.24
CCL20P78556 AC004408.2-201ENST00000623613 2777 ntBASIC16.52■□□□□ 0.24
CCL20P78556 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CCL20P78556 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
CCL20P78556 GPX1-201ENST00000419349 1106 ntBASIC16.52■□□□□ 0.24
CCL20P78556 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCL20P78556 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCL20P78556 AC099778.1-201ENST00000568593 1911 ntBASIC16.52■□□□□ 0.23
CCL20P78556 AP000974.1-201ENST00000623909 2387 ntBASIC16.52■□□□□ 0.23
CCL20P78556 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL20P78556 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL20P78556 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
CCL20P78556 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.23
CCL20P78556 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL20P78556 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCL20P78556 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL20P78556 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCL20P78556 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL20P78556 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CCL20P78556 AC026471.1-201ENST00000564629 3026 ntBASIC16.51■□□□□ 0.23
CCL20P78556 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CCL20P78556 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL20P78556 THA1P-201ENST00000590384 1145 ntBASIC16.51■□□□□ 0.23
CCL20P78556 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL20P78556 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL20P78556 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.51■□□□□ 0.23
CCL20P78556 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCL20P78556 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.51■□□□□ 0.23
CCL20P78556 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL20P78556 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CCL20P78556 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL20P78556 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CCL20P78556 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.5■□□□□ 0.23
CCL20P78556 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CCL20P78556 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCL20P78556 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL20P78556 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCL20P78556 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL20P78556 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL20P78556 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL20P78556 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL20P78556 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL20P78556 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCL20P78556 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CCL20P78556 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL20P78556 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.49■□□□□ 0.23
CCL20P78556 OR7E47P-201ENST00000546390 1422 ntBASIC16.49■□□□□ 0.23
CCL20P78556 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL20P78556 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL20P78556 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.49■□□□□ 0.23
CCL20P78556 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CCL20P78556 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.49■□□□□ 0.23
CCL20P78556 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCL20P78556 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL20P78556 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL20P78556 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CCL20P78556 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCL20P78556 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCL20P78556 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.48■□□□□ 0.23
CCL20P78556 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCL20P78556 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CCL20P78556 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CCL20P78556 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms