Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
UBA52P62987 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
UBA52P62987 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
UBA52P62987 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.95■□□□□ 0.46
UBA52P62987 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.95■□□□□ 0.46
UBA52P62987 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
UBA52P62987 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 AC092437.1-201ENST00000624794 1048 ntBASIC17.95■□□□□ 0.46
UBA52P62987 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.95■□□□□ 0.46
UBA52P62987 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.95■□□□□ 0.46
UBA52P62987 ALDH1A3-203ENST00000557963 1670 ntBASIC17.95■□□□□ 0.46
UBA52P62987 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UBA52P62987 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBA52P62987 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
UBA52P62987 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
UBA52P62987 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UBA52P62987 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.94■□□□□ 0.46
UBA52P62987 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
UBA52P62987 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 MIR572-201ENST00000384983 95 ntBASIC17.94■□□□□ 0.46
UBA52P62987 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
UBA52P62987 AC012414.1-201ENST00000556676 535 ntBASIC17.94■□□□□ 0.46
UBA52P62987 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.94■□□□□ 0.46
UBA52P62987 MIR6084-201ENST00000622012 110 ntBASIC17.94■□□□□ 0.46
UBA52P62987 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.94■□□□□ 0.46
UBA52P62987 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 AC087742.1-201ENST00000575880 1738 ntBASIC17.94■□□□□ 0.46
UBA52P62987 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
UBA52P62987 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.94■□□□□ 0.46
UBA52P62987 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
UBA52P62987 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
UBA52P62987 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
UBA52P62987 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.93■□□□□ 0.46
UBA52P62987 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
UBA52P62987 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA52P62987 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.93■□□□□ 0.46
UBA52P62987 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA52P62987 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA52P62987 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
UBA52P62987 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.93■□□□□ 0.46
UBA52P62987 AL354811.1-201ENST00000610286 706 ntBASIC17.93■□□□□ 0.46
UBA52P62987 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
UBA52P62987 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.93■□□□□ 0.46
UBA52P62987 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.93■□□□□ 0.46
UBA52P62987 LINC01006-201ENST00000333319 2292 ntBASIC17.93■□□□□ 0.46
UBA52P62987 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
UBA52P62987 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
UBA52P62987 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA52P62987 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA52P62987 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA52P62987 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.92■□□□□ 0.46
UBA52P62987 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.92■□□□□ 0.46
UBA52P62987 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA52P62987 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA52P62987 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.92■□□□□ 0.46
UBA52P62987 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBA52P62987 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
UBA52P62987 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.92■□□□□ 0.46
UBA52P62987 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBA52P62987 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBA52P62987 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA52P62987 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBA52P62987 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA52P62987 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA52P62987 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA52P62987 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA52P62987 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBA52P62987 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
UBA52P62987 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms