Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.8□□□□□ -0.04
RPL39P62891 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
RPL39P62891 PLK5-205ENST00000642079 1969 ntBASIC14.8□□□□□ -0.04
RPL39P62891 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
RPL39P62891 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RPL39P62891 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC14.8□□□□□ -0.04
RPL39P62891 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.79□□□□□ -0.04
RPL39P62891 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.79□□□□□ -0.04
RPL39P62891 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RPL39P62891 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 Z92544.1-202ENST00000571933 1220 ntBASIC14.79□□□□□ -0.04
RPL39P62891 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 AC012354.3-201ENST00000623734 483 ntBASIC14.79□□□□□ -0.04
RPL39P62891 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.79□□□□□ -0.04
RPL39P62891 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.79□□□□□ -0.04
RPL39P62891 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPL39P62891 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.78□□□□□ -0.04
RPL39P62891 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.78□□□□□ -0.04
RPL39P62891 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.78□□□□□ -0.04
RPL39P62891 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
RPL39P62891 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPL39P62891 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.78□□□□□ -0.04
RPL39P62891 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.78□□□□□ -0.04
RPL39P62891 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.78□□□□□ -0.04
RPL39P62891 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RPL39P62891 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RPL39P62891 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPL39P62891 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPL39P62891 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.78□□□□□ -0.04
RPL39P62891 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPL39P62891 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.78□□□□□ -0.04
RPL39P62891 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RPL39P62891 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.77□□□□□ -0.04
RPL39P62891 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
RPL39P62891 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.77□□□□□ -0.04
RPL39P62891 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RPL39P62891 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RPL39P62891 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RPL39P62891 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPL39P62891 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.77□□□□□ -0.05
RPL39P62891 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RPL39P62891 KRT125P-201ENST00000546827 989 ntBASIC14.77□□□□□ -0.05
RPL39P62891 pRNA.6-201ENST00000610482 90 ntBASIC14.77□□□□□ -0.05
RPL39P62891 pRNA.5-201ENST00000612139 90 ntBASIC14.77□□□□□ -0.05
RPL39P62891 pRNA.11-201ENST00000618423 90 ntBASIC14.77□□□□□ -0.05
RPL39P62891 pRNA.13-201ENST00000619112 90 ntBASIC14.77□□□□□ -0.05
RPL39P62891 EXOG-217ENST00000630638 197 ntTSL 5 BASIC14.77□□□□□ -0.05
RPL39P62891 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL39P62891 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RPL39P62891 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL39P62891 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL39P62891 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL39P62891 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RPL39P62891 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RPL39P62891 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL39P62891 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPL39P62891 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.76□□□□□ -0.05
RPL39P62891 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPL39P62891 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms