Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 AC006455.2-201ENST00000429931 906 ntBASIC19.13■□□□□ 0.65
CDC42P60953 TSPY9P-201ENST00000440215 945 ntBASIC19.13■□□□□ 0.65
CDC42P60953 TSPY11P-201ENST00000442607 1045 ntBASIC19.13■□□□□ 0.65
CDC42P60953 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC42P60953 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC42P60953 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 AP004607.7-201ENST00000527152 1677 ntBASIC19.13■□□□□ 0.65
CDC42P60953 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.13■□□□□ 0.65
CDC42P60953 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.13■□□□□ 0.65
CDC42P60953 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CDC42P60953 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC42P60953 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.13■□□□□ 0.65
CDC42P60953 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDC42P60953 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC42P60953 AC007952.6-201ENST00000573168 2673 ntBASIC19.12■□□□□ 0.65
CDC42P60953 AC003957.1-201ENST00000625108 2673 ntBASIC19.12■□□□□ 0.65
CDC42P60953 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CDC42P60953 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.12■□□□□ 0.65
CDC42P60953 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.12■□□□□ 0.65
CDC42P60953 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CDC42P60953 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC42P60953 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.11■□□□□ 0.65
CDC42P60953 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
CDC42P60953 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42P60953 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDC42P60953 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42P60953 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CDC42P60953 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42P60953 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42P60953 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42P60953 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CDC42P60953 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDC42P60953 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CDC42P60953 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDC42P60953 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CDC42P60953 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.1■□□□□ 0.65
CDC42P60953 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CDC42P60953 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CDC42P60953 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.1■□□□□ 0.65
CDC42P60953 PLK5-205ENST00000642079 1969 ntBASIC19.1■□□□□ 0.65
CDC42P60953 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CDC42P60953 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDC42P60953 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.09■□□□□ 0.65
CDC42P60953 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDC42P60953 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDC42P60953 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDC42P60953 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.09■□□□□ 0.65
CDC42P60953 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42P60953 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CDC42P60953 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42P60953 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42P60953 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.09■□□□□ 0.65
CDC42P60953 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42P60953 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42P60953 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.09■□□□□ 0.65
CDC42P60953 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42P60953 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CDC42P60953 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.09■□□□□ 0.65
CDC42P60953 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.08■□□□□ 0.65
CDC42P60953 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.08■□□□□ 0.65
CDC42P60953 MIR6724-1-201ENST00000616420 92 ntBASIC19.08■□□□□ 0.64
CDC42P60953 MIR6724-2-201ENST00000616483 92 ntBASIC19.08■□□□□ 0.64
CDC42P60953 MIR6724-4-201ENST00000617390 92 ntBASIC19.08■□□□□ 0.64
CDC42P60953 MIR6724-3-201ENST00000622482 92 ntBASIC19.08■□□□□ 0.64
CDC42P60953 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDC42P60953 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms