Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.99■□□□□ 0.47
AP3S2P59780 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
AP3S2P59780 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.99■□□□□ 0.47
AP3S2P59780 AC129492.7-201ENST00000622992 756 ntBASIC17.99■□□□□ 0.47
AP3S2P59780 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
AP3S2P59780 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.98■□□□□ 0.47
AP3S2P59780 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
AP3S2P59780 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
AP3S2P59780 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.98■□□□□ 0.47
AP3S2P59780 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
AP3S2P59780 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
AP3S2P59780 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.97■□□□□ 0.47
AP3S2P59780 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S2P59780 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S2P59780 PCDHAC2-203ENST00000615316 3011 ntBASIC17.97■□□□□ 0.47
AP3S2P59780 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
AP3S2P59780 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
AP3S2P59780 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
AP3S2P59780 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S2P59780 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.97■□□□□ 0.47
AP3S2P59780 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.97■□□□□ 0.47
AP3S2P59780 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S2P59780 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.97■□□□□ 0.47
AP3S2P59780 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.97■□□□□ 0.47
AP3S2P59780 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
AP3S2P59780 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S2P59780 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
AP3S2P59780 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
AP3S2P59780 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
AP3S2P59780 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.96■□□□□ 0.47
AP3S2P59780 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP3S2P59780 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP3S2P59780 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.96■□□□□ 0.46
AP3S2P59780 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
AP3S2P59780 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S2P59780 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3S2P59780 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S2P59780 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3S2P59780 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S2P59780 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
AP3S2P59780 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3S2P59780 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.95■□□□□ 0.46
AP3S2P59780 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.95■□□□□ 0.46
AP3S2P59780 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3S2P59780 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.95■□□□□ 0.46
AP3S2P59780 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.95■□□□□ 0.46
AP3S2P59780 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S2P59780 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S2P59780 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S2P59780 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP3S2P59780 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
AP3S2P59780 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3S2P59780 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3S2P59780 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
AP3S2P59780 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP3S2P59780 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
AP3S2P59780 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.94■□□□□ 0.46
AP3S2P59780 MIR6722-201ENST00000617286 78 ntBASIC17.94■□□□□ 0.46
AP3S2P59780 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP3S2P59780 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 AC087289.5-201ENST00000586076 3175 ntBASIC17.94■□□□□ 0.46
AP3S2P59780 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3S2P59780 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms