Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN20P56880 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
CLDN20P56880 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN20P56880 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN20P56880 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CLDN20P56880 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.18■□□□□ 0.66
CLDN20P56880 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN20P56880 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN20P56880 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN20P56880 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN20P56880 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLDN20P56880 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN20P56880 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN20P56880 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN20P56880 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
CLDN20P56880 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CLDN20P56880 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLDN20P56880 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN20P56880 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 FAM99A-202ENST00000538190 1989 ntBASIC19.17■□□□□ 0.66
CLDN20P56880 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN20P56880 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.17■□□□□ 0.66
CLDN20P56880 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN20P56880 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN20P56880 IKBKGP1-201ENST00000612193 1073 ntBASIC19.17■□□□□ 0.66
CLDN20P56880 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLDN20P56880 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN20P56880 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN20P56880 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN20P56880 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN20P56880 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN20P56880 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN20P56880 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN20P56880 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN20P56880 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN20P56880 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN20P56880 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN20P56880 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CLDN20P56880 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.16■□□□□ 0.66
CLDN20P56880 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN20P56880 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN20P56880 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CLDN20P56880 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLDN20P56880 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CLDN20P56880 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.16■□□□□ 0.66
CLDN20P56880 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLDN20P56880 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN20P56880 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN20P56880 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.15■□□□□ 0.66
CLDN20P56880 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.15■□□□□ 0.66
CLDN20P56880 AC104187.1-201ENST00000607510 612 ntBASIC19.15■□□□□ 0.66
CLDN20P56880 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLDN20P56880 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CLDN20P56880 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLDN20P56880 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
CLDN20P56880 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLDN20P56880 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.14■□□□□ 0.66
CLDN20P56880 AC003102.1-202ENST00000563394 1796 ntBASIC19.14■□□□□ 0.66
CLDN20P56880 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN20P56880 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN20P56880 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN20P56880 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN20P56880 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN20P56880 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CLDN20P56880 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.14■□□□□ 0.65
CLDN20P56880 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN20P56880 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLDN20P56880 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 AC005229.4-201ENST00000610085 2198 ntBASIC19.13■□□□□ 0.65
CLDN20P56880 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.13■□□□□ 0.65
CLDN20P56880 KRT19P1-201ENST00000405746 1186 ntBASIC19.13■□□□□ 0.65
CLDN20P56880 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.13■□□□□ 0.65
CLDN20P56880 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLDN20P56880 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms