Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.61■□□□□ 0.57
CAV3P56539 AP005212.1-201ENST00000581547 1997 ntBASIC18.61■□□□□ 0.57
CAV3P56539 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.61■□□□□ 0.57
CAV3P56539 GABARAPL3-202ENST00000624044 1851 ntBASIC18.61■□□□□ 0.57
CAV3P56539 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CAV3P56539 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.61■□□□□ 0.57
CAV3P56539 MIR4466-201ENST00000606121 54 ntBASIC18.61■□□□□ 0.57
CAV3P56539 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CAV3P56539 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.61■□□□□ 0.57
CAV3P56539 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CAV3P56539 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.61■□□□□ 0.57
CAV3P56539 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.6■□□□□ 0.57
CAV3P56539 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CAV3P56539 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.6■□□□□ 0.57
CAV3P56539 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.6■□□□□ 0.57
CAV3P56539 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CAV3P56539 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 AC092171.4-201ENST00000609130 632 ntBASIC18.6■□□□□ 0.57
CAV3P56539 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CAV3P56539 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.6■□□□□ 0.57
CAV3P56539 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CAV3P56539 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CAV3P56539 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAV3P56539 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAV3P56539 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAV3P56539 AC008406.3-201ENST00000620001 1374 ntBASIC18.59■□□□□ 0.57
CAV3P56539 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAV3P56539 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.59■□□□□ 0.57
CAV3P56539 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.59■□□□□ 0.57
CAV3P56539 AC079089.2-201ENST00000531211 1277 ntBASIC18.59■□□□□ 0.57
CAV3P56539 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CAV3P56539 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CAV3P56539 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CAV3P56539 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
CAV3P56539 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.59■□□□□ 0.57
CAV3P56539 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.59■□□□□ 0.57
CAV3P56539 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CAV3P56539 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CAV3P56539 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
CAV3P56539 AC087289.5-201ENST00000586076 3175 ntBASIC18.58■□□□□ 0.57
CAV3P56539 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAV3P56539 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAV3P56539 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CAV3P56539 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CAV3P56539 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAV3P56539 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CAV3P56539 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.58■□□□□ 0.56
CAV3P56539 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAV3P56539 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAV3P56539 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CAV3P56539 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAV3P56539 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAV3P56539 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CAV3P56539 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CAV3P56539 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.57■□□□□ 0.56
CAV3P56539 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAV3P56539 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CAV3P56539 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.57■□□□□ 0.56
CAV3P56539 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 AL136116.3-201ENST00000402907 1138 ntBASIC18.57■□□□□ 0.56
CAV3P56539 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.57■□□□□ 0.56
CAV3P56539 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
CAV3P56539 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.57■□□□□ 0.56
CAV3P56539 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.57■□□□□ 0.56
CAV3P56539 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CAV3P56539 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.57■□□□□ 0.56
CAV3P56539 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CAV3P56539 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAV3P56539 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAV3P56539 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CAV3P56539 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAV3P56539 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CAV3P56539 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.56■□□□□ 0.56
CAV3P56539 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CAV3P56539 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms