Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.74■□□□□ 0.91
CLNS1AP54105 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CLNS1AP54105 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.74■□□□□ 0.91
CLNS1AP54105 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.74■□□□□ 0.91
CLNS1AP54105 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.74■□□□□ 0.91
CLNS1AP54105 MIR6724-1-201ENST00000616420 92 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 MIR6724-2-201ENST00000616483 92 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 MIR6724-4-201ENST00000617390 92 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 MIR6724-3-201ENST00000622482 92 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 AL117332.1-201ENST00000622628 974 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 AC241377.3-202ENST00000626088 1088 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 AC241585.3-202ENST00000628937 1088 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 AC245100.8-202ENST00000629247 1058 ntBASIC20.74■□□□□ 0.91
CLNS1AP54105 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLNS1AP54105 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.74■□□□□ 0.91
CLNS1AP54105 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLNS1AP54105 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.73■□□□□ 0.91
CLNS1AP54105 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLNS1AP54105 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLNS1AP54105 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLNS1AP54105 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLNS1AP54105 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLNS1AP54105 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.73■□□□□ 0.91
CLNS1AP54105 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.73■□□□□ 0.91
CLNS1AP54105 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLNS1AP54105 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.73■□□□□ 0.91
CLNS1AP54105 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.73■□□□□ 0.91
CLNS1AP54105 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLNS1AP54105 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CLNS1AP54105 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CLNS1AP54105 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
CLNS1AP54105 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CLNS1AP54105 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.72■□□□□ 0.91
CLNS1AP54105 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.72■□□□□ 0.91
CLNS1AP54105 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLNS1AP54105 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLNS1AP54105 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLNS1AP54105 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.71■□□□□ 0.91
CLNS1AP54105 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLNS1AP54105 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.71■□□□□ 0.91
CLNS1AP54105 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CLNS1AP54105 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.71■□□□□ 0.91
CLNS1AP54105 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLNS1AP54105 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CLNS1AP54105 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
CLNS1AP54105 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
CLNS1AP54105 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.71■□□□□ 0.91
CLNS1AP54105 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.71■□□□□ 0.91
CLNS1AP54105 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLNS1AP54105 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLNS1AP54105 AFG3L1P-217ENST00000557444 2447 ntBASIC20.7■□□□□ 0.91
CLNS1AP54105 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CLNS1AP54105 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.7■□□□□ 0.91
CLNS1AP54105 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLNS1AP54105 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CLNS1AP54105 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLNS1AP54105 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CLNS1AP54105 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLNS1AP54105 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CLNS1AP54105 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLNS1AP54105 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLNS1AP54105 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLNS1AP54105 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLNS1AP54105 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.69■□□□□ 0.9
CLNS1AP54105 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.69■□□□□ 0.9
CLNS1AP54105 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLNS1AP54105 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLNS1AP54105 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLNS1AP54105 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms