Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MTND4LP12-201ENST00000448237 295 ntBASIC21.07■□□□□ 0.96
NUBP1P53384 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.07■□□□□ 0.96
NUBP1P53384 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NUBP1P53384 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.07■□□□□ 0.96
NUBP1P53384 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NUBP1P53384 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
NUBP1P53384 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUBP1P53384 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUBP1P53384 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUBP1P53384 KRT18P68-201ENST00000392293 1000 ntBASIC21.06■□□□□ 0.96
NUBP1P53384 AC239809.2-201ENST00000415381 517 ntBASIC21.06■□□□□ 0.96
NUBP1P53384 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUBP1P53384 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.06■□□□□ 0.96
NUBP1P53384 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.06■□□□□ 0.96
NUBP1P53384 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NUBP1P53384 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
NUBP1P53384 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUBP1P53384 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
NUBP1P53384 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.06■□□□□ 0.96
NUBP1P53384 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUBP1P53384 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.05■□□□□ 0.96
NUBP1P53384 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.05■□□□□ 0.96
NUBP1P53384 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.05■□□□□ 0.96
NUBP1P53384 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.05■□□□□ 0.96
NUBP1P53384 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.05■□□□□ 0.96
NUBP1P53384 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUBP1P53384 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUBP1P53384 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUBP1P53384 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUBP1P53384 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NUBP1P53384 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUBP1P53384 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.04■□□□□ 0.96
NUBP1P53384 AC005363.2-201ENST00000618631 242 ntBASIC21.04■□□□□ 0.96
NUBP1P53384 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUBP1P53384 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NUBP1P53384 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUBP1P53384 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUBP1P53384 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.03■□□□□ 0.96
NUBP1P53384 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUBP1P53384 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NUBP1P53384 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUBP1P53384 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.03■□□□□ 0.96
NUBP1P53384 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.03■□□□□ 0.96
NUBP1P53384 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.03■□□□□ 0.96
NUBP1P53384 AC145285.6-201ENST00000604632 637 ntBASIC21.03■□□□□ 0.96
NUBP1P53384 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUBP1P53384 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUBP1P53384 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUBP1P53384 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUBP1P53384 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NUBP1P53384 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUBP1P53384 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUBP1P53384 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUBP1P53384 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.02■□□□□ 0.96
NUBP1P53384 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUBP1P53384 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
NUBP1P53384 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NUBP1P53384 AP003400.6-201ENST00000624698 740 ntBASIC21.02■□□□□ 0.96
NUBP1P53384 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUBP1P53384 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUBP1P53384 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NUBP1P53384 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NUBP1P53384 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUBP1P53384 AC091799.1-201ENST00000422823 811 ntBASIC21.01■□□□□ 0.95
NUBP1P53384 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.01■□□□□ 0.95
NUBP1P53384 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.01■□□□□ 0.95
NUBP1P53384 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.01■□□□□ 0.95
NUBP1P53384 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.01■□□□□ 0.95
NUBP1P53384 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.01■□□□□ 0.95
NUBP1P53384 AL023875.1-201ENST00000640777 796 ntBASIC21.01■□□□□ 0.95
NUBP1P53384 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUBP1P53384 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUBP1P53384 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUBP1P53384 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUBP1P53384 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21■□□□□ 0.95
NUBP1P53384 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUBP1P53384 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NUBP1P53384 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21■□□□□ 0.95
NUBP1P53384 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21■□□□□ 0.95
NUBP1P53384 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
NUBP1P53384 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUBP1P53384 CFTRP2-201ENST00000634304 199 ntBASIC21■□□□□ 0.95
NUBP1P53384 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NUBP1P53384 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUBP1P53384 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NUBP1P53384 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NUBP1P53384 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NUBP1P53384 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUBP1P53384 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms