Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SLC25A1P53007 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC25A1P53007 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC25A1P53007 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC25A1P53007 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC25A1P53007 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SLC25A1P53007 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.63■□□□□ 0.57
SLC25A1P53007 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC25A1P53007 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC25A1P53007 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC25A1P53007 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC25A1P53007 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SLC25A1P53007 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC25A1P53007 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC25A1P53007 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC25A1P53007 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC25A1P53007 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC25A1P53007 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC25A1P53007 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.63■□□□□ 0.57
SLC25A1P53007 AC106739.1-201ENST00000617035 715 ntBASIC18.63■□□□□ 0.57
SLC25A1P53007 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC25A1P53007 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC25A1P53007 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.63■□□□□ 0.57
SLC25A1P53007 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC25A1P53007 AC121338.2-201ENST00000622535 1744 ntBASIC18.63■□□□□ 0.57
SLC25A1P53007 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC25A1P53007 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC25A1P53007 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC25A1P53007 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC25A1P53007 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC25A1P53007 LINC01006-201ENST00000333319 2292 ntBASIC18.62■□□□□ 0.57
SLC25A1P53007 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC25A1P53007 SLC25A24-204ENST00000569674 2357 ntBASIC18.62■□□□□ 0.57
SLC25A1P53007 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 EDA-201ENST00000338901 1233 ntBASIC18.62■□□□□ 0.57
SLC25A1P53007 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 MIR572-201ENST00000384983 95 ntBASIC18.62■□□□□ 0.57
SLC25A1P53007 AC096631.2-201ENST00000436136 790 ntBASIC18.62■□□□□ 0.57
SLC25A1P53007 PBX2P1-201ENST00000493219 1291 ntBASIC18.62■□□□□ 0.57
SLC25A1P53007 AP001330.3-201ENST00000520123 633 ntBASIC18.62■□□□□ 0.57
SLC25A1P53007 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC25A1P53007 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SLC25A1P53007 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A1P53007 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A1P53007 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A1P53007 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC25A1P53007 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC25A1P53007 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A1P53007 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC25A1P53007 AC008406.3-201ENST00000620001 1374 ntBASIC18.61■□□□□ 0.57
SLC25A1P53007 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC25A1P53007 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC25A1P53007 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.61■□□□□ 0.57
SLC25A1P53007 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.61■□□□□ 0.57
SLC25A1P53007 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC25A1P53007 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A1P53007 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A1P53007 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A1P53007 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 GABARAPL3-202ENST00000624044 1851 ntBASIC18.6■□□□□ 0.57
SLC25A1P53007 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC25A1P53007 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 RASA4CP-201ENST00000424092 1398 ntBASIC18.6■□□□□ 0.57
SLC25A1P53007 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC25A1P53007 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC25A1P53007 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.6■□□□□ 0.57
SLC25A1P53007 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.6■□□□□ 0.57
SLC25A1P53007 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC25A1P53007 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SLC25A1P53007 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLC25A1P53007 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SLC25A1P53007 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A1P53007 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC25A1P53007 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
SLC25A1P53007 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A1P53007 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A1P53007 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC25A1P53007 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC25A1P53007 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.59■□□□□ 0.57
SLC25A1P53007 AL355001.2-201ENST00000620617 1191 ntBASIC18.59■□□□□ 0.57
SLC25A1P53007 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC25A1P53007 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A1P53007 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A1P53007 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A1P53007 AP005212.1-201ENST00000581547 1997 ntBASIC18.59■□□□□ 0.57
SLC25A1P53007 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A1P53007 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SLC25A1P53007 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SLC25A1P53007 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms