Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HMGA2P52926 AC009237.3-201ENST00000393279 1427 ntBASIC19.16■□□□□ 0.66
HMGA2P52926 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HMGA2P52926 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
HMGA2P52926 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.15■□□□□ 0.66
HMGA2P52926 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGA2P52926 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGA2P52926 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HMGA2P52926 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 AC055733.4-201ENST00000638462 1354 ntBASIC19.15■□□□□ 0.66
HMGA2P52926 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HMGA2P52926 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HMGA2P52926 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.15■□□□□ 0.66
HMGA2P52926 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HMGA2P52926 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.15■□□□□ 0.66
HMGA2P52926 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
HMGA2P52926 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGA2P52926 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
HMGA2P52926 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGA2P52926 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGA2P52926 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HMGA2P52926 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGA2P52926 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HMGA2P52926 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HMGA2P52926 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGA2P52926 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGA2P52926 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.14■□□□□ 0.65
HMGA2P52926 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGA2P52926 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
HMGA2P52926 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.14■□□□□ 0.65
HMGA2P52926 AL162377.1-201ENST00000618844 1793 ntBASIC19.14■□□□□ 0.65
HMGA2P52926 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
HMGA2P52926 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
HMGA2P52926 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
HMGA2P52926 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.13■□□□□ 0.65
HMGA2P52926 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.13■□□□□ 0.65
HMGA2P52926 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HMGA2P52926 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGA2P52926 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HMGA2P52926 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
HMGA2P52926 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.13■□□□□ 0.65
HMGA2P52926 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HMGA2P52926 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGA2P52926 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGA2P52926 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGA2P52926 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGA2P52926 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HMGA2P52926 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGA2P52926 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGA2P52926 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HMGA2P52926 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.12■□□□□ 0.65
HMGA2P52926 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGA2P52926 BX842568.3-201ENST00000418104 571 ntBASIC19.12■□□□□ 0.65
HMGA2P52926 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.12■□□□□ 0.65
HMGA2P52926 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
HMGA2P52926 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HMGA2P52926 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.12■□□□□ 0.65
HMGA2P52926 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.12■□□□□ 0.65
HMGA2P52926 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HMGA2P52926 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HMGA2P52926 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.11■□□□□ 0.65
HMGA2P52926 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGA2P52926 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.11■□□□□ 0.65
HMGA2P52926 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
HMGA2P52926 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HMGA2P52926 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms