Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
ZNF140P52738 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF140P52738 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.93■□□□□ 0.94
ZNF140P52738 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.93■□□□□ 0.94
ZNF140P52738 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
ZNF140P52738 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZNF140P52738 NTF6G-201ENST00000591094 616 ntBASIC20.92■□□□□ 0.94
ZNF140P52738 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
ZNF140P52738 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.92■□□□□ 0.94
ZNF140P52738 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZNF140P52738 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.92■□□□□ 0.94
ZNF140P52738 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ZNF140P52738 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.91■□□□□ 0.94
ZNF140P52738 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.91■□□□□ 0.94
ZNF140P52738 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ZNF140P52738 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ZNF140P52738 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.91■□□□□ 0.94
ZNF140P52738 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ZNF140P52738 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
ZNF140P52738 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.9■□□□□ 0.94
ZNF140P52738 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF140P52738 KRT16P2-201ENST00000414673 1423 ntBASIC20.9■□□□□ 0.94
ZNF140P52738 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 KRT19P1-201ENST00000405746 1186 ntBASIC20.9■□□□□ 0.94
ZNF140P52738 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.9■□□□□ 0.94
ZNF140P52738 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ZNF140P52738 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.89■□□□□ 0.94
ZNF140P52738 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.89■□□□□ 0.94
ZNF140P52738 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.89■□□□□ 0.94
ZNF140P52738 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.89■□□□□ 0.94
ZNF140P52738 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.89■□□□□ 0.94
ZNF140P52738 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ZNF140P52738 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ZNF140P52738 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF140P52738 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF140P52738 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF140P52738 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
ZNF140P52738 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF140P52738 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.89■□□□□ 0.93
ZNF140P52738 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.89■□□□□ 0.93
ZNF140P52738 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF140P52738 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ZNF140P52738 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ZNF140P52738 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ZNF140P52738 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF140P52738 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZNF140P52738 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF140P52738 KRT18P5-201ENST00000436075 1291 ntBASIC20.88■□□□□ 0.93
ZNF140P52738 SLC7A5P2-201ENST00000553010 536 ntBASIC20.88■□□□□ 0.93
ZNF140P52738 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.88■□□□□ 0.93
ZNF140P52738 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF140P52738 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF140P52738 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNF140P52738 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF140P52738 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNF140P52738 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ZNF140P52738 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
ZNF140P52738 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNF140P52738 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF140P52738 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNF140P52738 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNF140P52738 KRT18P20-201ENST00000548986 1279 ntBASIC20.87■□□□□ 0.93
ZNF140P52738 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF140P52738 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF140P52738 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF140P52738 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNF140P52738 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF140P52738 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF140P52738 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF140P52738 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF140P52738 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF140P52738 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF140P52738 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF140P52738 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF140P52738 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNF140P52738 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
ZNF140P52738 AC120498.10-201ENST00000621827 505 ntBASIC20.86■□□□□ 0.93
ZNF140P52738 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF140P52738 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNF140P52738 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms