Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6CP48668 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT6CP48668 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6CP48668 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT6CP48668 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6CP48668 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT6CP48668 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT6CP48668 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT6CP48668 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.27■□□□□ 0.84
KRT6CP48668 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT6CP48668 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT6CP48668 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT6CP48668 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.27■□□□□ 0.83
KRT6CP48668 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT6CP48668 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT6CP48668 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT6CP48668 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT6CP48668 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.26■□□□□ 0.83
KRT6CP48668 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6CP48668 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.26■□□□□ 0.83
KRT6CP48668 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6CP48668 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6CP48668 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT6CP48668 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT6CP48668 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT6CP48668 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
KRT6CP48668 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KRT6CP48668 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
KRT6CP48668 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KRT6CP48668 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT6CP48668 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT6CP48668 AC012414.1-201ENST00000556676 535 ntBASIC20.25■□□□□ 0.83
KRT6CP48668 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.25■□□□□ 0.83
KRT6CP48668 AL139246.5-201ENST00000606645 996 ntBASIC20.25■□□□□ 0.83
KRT6CP48668 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.25■□□□□ 0.83
KRT6CP48668 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.25■□□□□ 0.83
KRT6CP48668 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
KRT6CP48668 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.25■□□□□ 0.83
KRT6CP48668 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.24■□□□□ 0.83
KRT6CP48668 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
KRT6CP48668 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT6CP48668 SUDS3P1-201ENST00000505831 966 ntBASIC20.24■□□□□ 0.83
KRT6CP48668 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.24■□□□□ 0.83
KRT6CP48668 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.24■□□□□ 0.83
KRT6CP48668 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.24■□□□□ 0.83
KRT6CP48668 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
KRT6CP48668 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT6CP48668 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT6CP48668 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
KRT6CP48668 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KRT6CP48668 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.23■□□□□ 0.83
KRT6CP48668 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KRT6CP48668 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.23■□□□□ 0.83
KRT6CP48668 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
KRT6CP48668 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.23■□□□□ 0.83
KRT6CP48668 AL354811.1-201ENST00000610286 706 ntBASIC20.23■□□□□ 0.83
KRT6CP48668 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
KRT6CP48668 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.22■□□□□ 0.83
KRT6CP48668 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT6CP48668 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.22■□□□□ 0.83
KRT6CP48668 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.22■□□□□ 0.83
KRT6CP48668 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRT6CP48668 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms