Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP13P45452 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MMP13P45452 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MMP13P45452 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.75■■□□□ 1.07
MMP13P45452 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.75■■□□□ 1.07
MMP13P45452 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP13P45452 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MMP13P45452 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MMP13P45452 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.74■■□□□ 1.07
MMP13P45452 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.74■■□□□ 1.07
MMP13P45452 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.74■■□□□ 1.07
MMP13P45452 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.74■■□□□ 1.07
MMP13P45452 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.74■■□□□ 1.07
MMP13P45452 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MMP13P45452 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.74■■□□□ 1.07
MMP13P45452 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
MMP13P45452 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.74■■□□□ 1.07
MMP13P45452 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.74■■□□□ 1.07
MMP13P45452 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MMP13P45452 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MMP13P45452 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MMP13P45452 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.73■■□□□ 1.07
MMP13P45452 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 YBX1P1-201ENST00000445822 960 ntBASIC21.73■■□□□ 1.07
MMP13P45452 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.73■■□□□ 1.07
MMP13P45452 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.73■■□□□ 1.07
MMP13P45452 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
MMP13P45452 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MMP13P45452 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.73■■□□□ 1.07
MMP13P45452 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MMP13P45452 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
MMP13P45452 AC055733.4-201ENST00000638462 1354 ntBASIC21.73■■□□□ 1.07
MMP13P45452 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP13P45452 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP13P45452 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP13P45452 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP13P45452 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MMP13P45452 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.72■■□□□ 1.07
MMP13P45452 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.72■■□□□ 1.07
MMP13P45452 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MMP13P45452 LINC02228-203ENST00000641970 1355 ntBASIC21.72■■□□□ 1.07
MMP13P45452 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MMP13P45452 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MMP13P45452 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.71■■□□□ 1.07
MMP13P45452 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
MMP13P45452 AC123595.1-201ENST00000440769 1046 ntBASIC21.71■■□□□ 1.07
MMP13P45452 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.71■■□□□ 1.07
MMP13P45452 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.71■■□□□ 1.07
MMP13P45452 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP13P45452 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
MMP13P45452 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP13P45452 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP13P45452 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MMP13P45452 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MMP13P45452 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP13P45452 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP13P45452 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.7■■□□□ 1.06
MMP13P45452 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
MMP13P45452 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.7■■□□□ 1.06
MMP13P45452 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MMP13P45452 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MMP13P45452 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
MMP13P45452 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
MMP13P45452 AC003102.1-202ENST00000563394 1796 ntBASIC21.69■■□□□ 1.06
MMP13P45452 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP13P45452 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP13P45452 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MMP13P45452 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.69■■□□□ 1.06
MMP13P45452 AC104564.3-201ENST00000582367 638 ntBASIC21.69■■□□□ 1.06
MMP13P45452 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.69■■□□□ 1.06
MMP13P45452 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP13P45452 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MMP13P45452 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms