Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PRPHP41219 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PRPHP41219 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.71■■□□□ 1.39
PRPHP41219 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.71■■□□□ 1.39
PRPHP41219 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRPHP41219 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.71■■□□□ 1.39
PRPHP41219 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRPHP41219 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PRPHP41219 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PRPHP41219 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRPHP41219 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
PRPHP41219 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.7■■□□□ 1.38
PRPHP41219 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
PRPHP41219 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.7■■□□□ 1.38
PRPHP41219 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PRPHP41219 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.7■■□□□ 1.38
PRPHP41219 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRPHP41219 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.7■■□□□ 1.38
PRPHP41219 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRPHP41219 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRPHP41219 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRPHP41219 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRPHP41219 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.69■■□□□ 1.38
PRPHP41219 AC034268.1-201ENST00000441047 882 ntBASIC23.69■■□□□ 1.38
PRPHP41219 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.69■■□□□ 1.38
PRPHP41219 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.69■■□□□ 1.38
PRPHP41219 KRT18P61-201ENST00000585825 1298 ntBASIC23.69■■□□□ 1.38
PRPHP41219 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PRPHP41219 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPHP41219 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.69■■□□□ 1.38
PRPHP41219 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
PRPHP41219 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.69■■□□□ 1.38
PRPHP41219 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRPHP41219 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPHP41219 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRPHP41219 PKD1P6-201ENST00000343738 4769 ntBASIC23.68■■□□□ 1.38
PRPHP41219 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPHP41219 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPHP41219 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PRPHP41219 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPHP41219 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.68■■□□□ 1.38
PRPHP41219 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.68■■□□□ 1.38
PRPHP41219 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPHP41219 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PRPHP41219 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PRPHP41219 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPHP41219 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRPHP41219 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.68■■□□□ 1.38
PRPHP41219 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.68■■□□□ 1.38
PRPHP41219 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPHP41219 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
PRPHP41219 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPHP41219 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPHP41219 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
PRPHP41219 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPHP41219 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPHP41219 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PRPHP41219 AC026271.2-201ENST00000428091 497 ntBASIC23.67■■□□□ 1.38
PRPHP41219 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPHP41219 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.67■■□□□ 1.38
PRPHP41219 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRPHP41219 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.67■■□□□ 1.38
PRPHP41219 AP001160.3-201ENST00000601484 763 ntBASIC23.67■■□□□ 1.38
PRPHP41219 AC087623.3-201ENST00000607047 1098 ntBASIC23.67■■□□□ 1.38
PRPHP41219 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPHP41219 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRPHP41219 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PRPHP41219 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPHP41219 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.66■■□□□ 1.38
PRPHP41219 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRPHP41219 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.66■■□□□ 1.38
PRPHP41219 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PRPHP41219 KRT16P2-201ENST00000414673 1423 ntBASIC23.66■■□□□ 1.38
PRPHP41219 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PRPHP41219 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.65■■□□□ 1.38
PRPHP41219 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.65■■□□□ 1.38
PRPHP41219 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.65■■□□□ 1.38
PRPHP41219 KRT18P20-201ENST00000548986 1279 ntBASIC23.65■■□□□ 1.38
PRPHP41219 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.65■■□□□ 1.38
PRPHP41219 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPHP41219 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PRPHP41219 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PRPHP41219 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPHP41219 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
PRPHP41219 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.64■■□□□ 1.38
PRPHP41219 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.64■■□□□ 1.38
PRPHP41219 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.64■■□□□ 1.38
PRPHP41219 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPHP41219 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRPHP41219 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRPHP41219 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRPHP41219 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.64■■□□□ 1.37
PRPHP41219 RARRES2P6-201ENST00000567333 442 ntBASIC23.64■■□□□ 1.37
PRPHP41219 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
PRPHP41219 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRPHP41219 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRPHP41219 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
PRPHP41219 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRPHP41219 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.64■■□□□ 1.37
PRPHP41219 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms