Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 SPN1YPR133C 1233 nt3.85□□□□□ -1.79
TDP1P38319 FRT2YAL028W 1587 nt3.85□□□□□ -1.79
TDP1P38319 YOL019WYOL019W 1656 nt3.84□□□□□ -1.79
TDP1P38319 SWH1YAR042W 3567 nt3.84□□□□□ -1.79
TDP1P38319 YCR022CYCR022C 345 nt3.84□□□□□ -1.79
TDP1P38319 RPA14YDR156W 414 nt3.84□□□□□ -1.79
TDP1P38319 YDR246W-AYDR246W-A 201 nt3.84□□□□□ -1.79
TDP1P38319 GPP2YER062C 753 nt3.84□□□□□ -1.79
TDP1P38319 YER175W-AYER175W-A 165 nt3.84□□□□□ -1.79
TDP1P38319 YPT53YNL093W 663 nt3.84□□□□□ -1.79
TDP1P38319 YOR131CYOR131C 657 nt3.84□□□□□ -1.79
TDP1P38319 RPL19AYBR084C-A 570 nt3.84□□□□□ -1.79
TDP1P38319 YJL049WYJL049W 1353 nt3.84□□□□□ -1.79
TDP1P38319 NAT1YDL040C 2565 nt3.84□□□□□ -1.8
TDP1P38319 15S_rRNA15S_rRNA 1649 nt3.84□□□□□ -1.8
TDP1P38319 MSK1YNL073W 1731 nt3.84□□□□□ -1.8
TDP1P38319 ECM16YMR128W 3804 nt3.83□□□□□ -1.8
TDP1P38319 RRP42YDL111C 798 nt3.83□□□□□ -1.8
TDP1P38319 YER034WYER034W 558 nt3.83□□□□□ -1.8
TDP1P38319 ECL1YGR146C 636 nt3.83□□□□□ -1.8
TDP1P38319 YGR228WYGR228W 345 nt3.83□□□□□ -1.8
TDP1P38319 YKL083WYKL083W 615 nt3.83□□□□□ -1.8
TDP1P38319 ATG10YLL042C 504 nt3.83□□□□□ -1.8
TDP1P38319 FLD1YLR404W 858 nt3.83□□□□□ -1.8
TDP1P38319 RAD33YML011C 534 nt3.83□□□□□ -1.8
TDP1P38319 GDH2YDL215C 3279 nt3.83□□□□□ -1.8
TDP1P38319 SPC105YGL093W 2754 nt3.82□□□□□ -1.8
TDP1P38319 TFB2YPL122C 1542 nt3.82□□□□□ -1.8
TDP1P38319 GWT1YJL091C 1473 nt3.82□□□□□ -1.8
TDP1P38319 RSM24YDR175C 960 nt3.82□□□□□ -1.8
TDP1P38319 EPT1YHR123W 1176 nt3.82□□□□□ -1.8
TDP1P38319 YKT6YKL196C 603 nt3.82□□□□□ -1.8
TDP1P38319 SDO1YLR022C 753 nt3.82□□□□□ -1.8
TDP1P38319 RDN58-1RDN58-1 158 nt3.82□□□□□ -1.8
TDP1P38319 RDN58-2RDN58-2 158 nt3.82□□□□□ -1.8
TDP1P38319 YPL035CYPL035C 348 nt3.82□□□□□ -1.8
TDP1P38319 PHO88YBR106W 567 nt3.82□□□□□ -1.8
TDP1P38319 YDR340WYDR340W 303 nt3.81□□□□□ -1.8
TDP1P38319 SDC1YDR469W 528 nt3.81□□□□□ -1.8
TDP1P38319 SEC4YFL005W 648 nt3.81□□□□□ -1.8
TDP1P38319 tL(UAG)JtL(UAG)J 82 nt3.81□□□□□ -1.8
TDP1P38319 tL(UAG)L1tL(UAG)L1 82 nt3.81□□□□□ -1.8
TDP1P38319 tL(UAG)L2tL(UAG)L2 82 nt3.81□□□□□ -1.8
TDP1P38319 YHL048C-AYHL048C-A 135 nt3.81□□□□□ -1.8
TDP1P38319 MCR1YKL150W 909 nt3.81□□□□□ -1.8
TDP1P38319 YLR224WYLR224W 1110 nt3.81□□□□□ -1.8
TDP1P38319 YOR053WYOR053W 342 nt3.81□□□□□ -1.8
TDP1P38319 IDH2YOR136W 1110 nt3.81□□□□□ -1.8
TDP1P38319 YPL038W-AYPL038W-A 192 nt3.81□□□□□ -1.8
TDP1P38319 MSS18YPR134W 807 nt3.81□□□□□ -1.8
TDP1P38319 SUS1YBR111W-A 291 nt3.81□□□□□ -1.8
TDP1P38319 PRM15YMR278W 1869 nt3.81□□□□□ -1.8
TDP1P38319 SEC2YNL272C 2280 nt3.81□□□□□ -1.8
TDP1P38319 YHR214C-CYHR214C-C 1437 nt3.8□□□□□ -1.8
TDP1P38319 SWF1YDR126W 1011 nt3.8□□□□□ -1.8
TDP1P38319 FAR7YFR008W 666 nt3.8□□□□□ -1.8
TDP1P38319 YGL108CYGL108C 423 nt3.8□□□□□ -1.8
TDP1P38319 YLR154W-BYLR154W-B 165 nt3.8□□□□□ -1.8
TDP1P38319 RPL18AYOL120C 561 nt3.8□□□□□ -1.8
TDP1P38319 SFM1YOR021C 642 nt3.8□□□□□ -1.8
TDP1P38319 ARP5YNL059C 2268 nt3.8□□□□□ -1.8
TDP1P38319 OAF3YKR064W 2592 nt3.79□□□□□ -1.8
TDP1P38319 STE24YJR117W 1362 nt3.79□□□□□ -1.8
TDP1P38319 MSM1YGR171C 1728 nt3.79□□□□□ -1.8
TDP1P38319 BIK1YCL029C 1323 nt3.79□□□□□ -1.8
TDP1P38319 VPS33YLR396C 2076 nt3.79□□□□□ -1.8
TDP1P38319 YPD1YDL235C 504 nt3.79□□□□□ -1.8
TDP1P38319 VAB2YEL005C 849 nt3.79□□□□□ -1.8
TDP1P38319 CHZ1YER030W 462 nt3.79□□□□□ -1.8
TDP1P38319 YJR112W-AYJR112W-A 330 nt3.79□□□□□ -1.8
TDP1P38319 ENT3YJR125C 1227 nt3.79□□□□□ -1.8
TDP1P38319 ASI2YNL159C 870 nt3.79□□□□□ -1.8
TDP1P38319 YPR136CYPR136C 513 nt3.79□□□□□ -1.8
TDP1P38319 YBR285WYBR285W 435 nt3.79□□□□□ -1.8
TDP1P38319 ELM1YKL048C 1923 nt3.79□□□□□ -1.8
TDP1P38319 MUD2YKL074C 1584 nt3.79□□□□□ -1.8
TDP1P38319 NUP85YJR042W 2235 nt3.79□□□□□ -1.8
TDP1P38319 YMR018WYMR018W 1545 nt3.79□□□□□ -1.8
TDP1P38319 SKO1YNL167C 1944 nt3.78□□□□□ -1.8
TDP1P38319 YDL240C-AYDL240C-A 138 nt3.78□□□□□ -1.8
TDP1P38319 HIS5YIL116W 1158 nt3.78□□□□□ -1.8
TDP1P38319 NNT1YLR285W 786 nt3.78□□□□□ -1.8
TDP1P38319 TIF11YMR260C 462 nt3.78□□□□□ -1.8
TDP1P38319 HUB1YNR032C-A 222 nt3.78□□□□□ -1.8
TDP1P38319 YPR050CYPR050C 414 nt3.78□□□□□ -1.8
TDP1P38319 CHD1YER164W 4407 nt3.78□□□□□ -1.8
TDP1P38319 AVT7YIL088C 1473 nt3.78□□□□□ -1.8
TDP1P38319 POL1YNL102W 4407 nt3.78□□□□□ -1.8
TDP1P38319 VHR1YIL056W 1923 nt3.78□□□□□ -1.81
TDP1P38319 IOC2YLR095C 2439 nt3.78□□□□□ -1.81
TDP1P38319 SLY41YOR307C 1362 nt3.77□□□□□ -1.81
TDP1P38319 YKR078WYKR078W 1758 nt3.77□□□□□ -1.81
TDP1P38319 Q0032Q0032 291 nt3.77□□□□□ -1.81
TDP1P38319 RPS29BYDL061C 171 nt3.77□□□□□ -1.81
TDP1P38319 GPI19YDR437W 423 nt3.77□□□□□ -1.81
TDP1P38319 YER135CYER135C 393 nt3.77□□□□□ -1.81
TDP1P38319 SPT2YER161C 1002 nt3.77□□□□□ -1.81
TDP1P38319 SAE2YGL175C 1038 nt3.77□□□□□ -1.81
TDP1P38319 REC104YHR157W 549 nt3.77□□□□□ -1.81
TDP1P38319 RPB3YIL021W 957 nt3.77□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 37.4 ms