Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A4P31645 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A4P31645 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A4P31645 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC6A4P31645 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC6A4P31645 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A4P31645 AC005181.1-201ENST00000604782 1256 ntBASIC21.61■■□□□ 1.05
SLC6A4P31645 AC013268.1-206ENST00000638368 961 ntBASIC21.61■■□□□ 1.05
SLC6A4P31645 AC112229.1-201ENST00000639295 961 ntBASIC21.61■■□□□ 1.05
SLC6A4P31645 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SLC6A4P31645 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC6A4P31645 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
SLC6A4P31645 FBXW4P1-201ENST00000426721 2239 ntBASIC21.6■■□□□ 1.05
SLC6A4P31645 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
SLC6A4P31645 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 HLA-L-209ENST00000420110 1011 ntBASIC21.6■■□□□ 1.05
SLC6A4P31645 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC6A4P31645 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC6A4P31645 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC6A4P31645 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.6■■□□□ 1.05
SLC6A4P31645 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC6A4P31645 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SLC6A4P31645 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A4P31645 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A4P31645 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A4P31645 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC6A4P31645 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC6A4P31645 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A4P31645 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC6A4P31645 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A4P31645 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A4P31645 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A4P31645 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.59■■□□□ 1.05
SLC6A4P31645 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A4P31645 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SLC6A4P31645 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A4P31645 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC6A4P31645 AC068338.2-201ENST00000563278 1430 ntBASIC21.58■■□□□ 1.05
SLC6A4P31645 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A4P31645 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SLC6A4P31645 NCF1B-203ENST00000435988 1254 ntBASIC21.58■■□□□ 1.05
SLC6A4P31645 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A4P31645 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC6A4P31645 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.58■■□□□ 1.05
SLC6A4P31645 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A4P31645 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.58■■□□□ 1.04
SLC6A4P31645 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A4P31645 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
SLC6A4P31645 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A4P31645 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SLC6A4P31645 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.58■■□□□ 1.04
SLC6A4P31645 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.57■■□□□ 1.04
SLC6A4P31645 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 AC007322.4-201ENST00000509611 723 ntBASIC21.57■■□□□ 1.04
SLC6A4P31645 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC6A4P31645 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC6A4P31645 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC6A4P31645 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC6A4P31645 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A4P31645 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A4P31645 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SLC6A4P31645 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC6A4P31645 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 AC243732.1-201ENST00000612648 864 ntBASIC21.56■■□□□ 1.04
SLC6A4P31645 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SLC6A4P31645 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SLC6A4P31645 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC6A4P31645 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A4P31645 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC6A4P31645 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A4P31645 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A4P31645 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC6A4P31645 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A4P31645 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC6A4P31645 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.55■■□□□ 1.04
SLC6A4P31645 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
SLC6A4P31645 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.55■■□□□ 1.04
SLC6A4P31645 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms