Protein–RNA interactions for Protein: P28908

TNFRSF8, Tumor necrosis factor receptor superfamily member 8, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8P28908 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFRSF8P28908 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF8P28908 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TNFRSF8P28908 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.66■■□□□ 1.06
TNFRSF8P28908 AL031848.2-201ENST00000607670 837 ntBASIC21.66■■□□□ 1.06
TNFRSF8P28908 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF8P28908 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF8P28908 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFRSF8P28908 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFRSF8P28908 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 BX664725.1-201ENST00000438252 379 ntBASIC21.65■■□□□ 1.06
TNFRSF8P28908 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFRSF8P28908 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFRSF8P28908 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFRSF8P28908 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.64■■□□□ 1.06
TNFRSF8P28908 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TNFRSF8P28908 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNFRSF8P28908 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.64■■□□□ 1.06
TNFRSF8P28908 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 OR2I1P-207ENST00000453522 948 ntBASIC21.64■■□□□ 1.05
TNFRSF8P28908 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF8P28908 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TNFRSF8P28908 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF8P28908 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFRSF8P28908 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
TNFRSF8P28908 AL512408.1-201ENST00000569378 2000 ntBASIC21.63■■□□□ 1.05
TNFRSF8P28908 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF8P28908 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF8P28908 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TNFRSF8P28908 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF8P28908 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFRSF8P28908 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFRSF8P28908 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TNFRSF8P28908 PCDHAC2-203ENST00000615316 3011 ntBASIC21.63■■□□□ 1.05
TNFRSF8P28908 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF8P28908 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF8P28908 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
TNFRSF8P28908 AP004607.7-201ENST00000527152 1677 ntBASIC21.63■■□□□ 1.05
TNFRSF8P28908 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFRSF8P28908 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF8P28908 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF8P28908 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
TNFRSF8P28908 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF8P28908 SMG8-203ENST00000578922 2178 ntBASIC21.62■■□□□ 1.05
TNFRSF8P28908 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
TNFRSF8P28908 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.62■■□□□ 1.05
TNFRSF8P28908 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF8P28908 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFRSF8P28908 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 MTDHP2-201ENST00000601468 714 ntBASIC21.61■■□□□ 1.05
TNFRSF8P28908 pRNA.6-201ENST00000610482 90 ntBASIC21.61■■□□□ 1.05
TNFRSF8P28908 pRNA.5-201ENST00000612139 90 ntBASIC21.61■■□□□ 1.05
TNFRSF8P28908 pRNA.11-201ENST00000618423 90 ntBASIC21.61■■□□□ 1.05
TNFRSF8P28908 pRNA.13-201ENST00000619112 90 ntBASIC21.61■■□□□ 1.05
TNFRSF8P28908 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFRSF8P28908 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.61■■□□□ 1.05
TNFRSF8P28908 AC099778.1-201ENST00000568593 1911 ntBASIC21.61■■□□□ 1.05
TNFRSF8P28908 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF8P28908 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
TNFRSF8P28908 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF8P28908 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.6■■□□□ 1.05
TNFRSF8P28908 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF8P28908 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.6■■□□□ 1.05
TNFRSF8P28908 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.6■■□□□ 1.05
TNFRSF8P28908 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TNFRSF8P28908 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF8P28908 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF8P28908 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFRSF8P28908 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms