Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APEX1P27695 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APEX1P27695 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APEX1P27695 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
APEX1P27695 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
APEX1P27695 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
APEX1P27695 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APEX1P27695 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
APEX1P27695 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APEX1P27695 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
APEX1P27695 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.83■□□□□ 0.6
APEX1P27695 AC092666.2-201ENST00000613287 246 ntBASIC18.83■□□□□ 0.6
APEX1P27695 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APEX1P27695 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
APEX1P27695 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APEX1P27695 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.83■□□□□ 0.6
APEX1P27695 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.83■□□□□ 0.6
APEX1P27695 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APEX1P27695 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.83■□□□□ 0.6
APEX1P27695 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.82■□□□□ 0.6
APEX1P27695 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.82■□□□□ 0.6
APEX1P27695 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.82■□□□□ 0.6
APEX1P27695 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.82■□□□□ 0.6
APEX1P27695 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.82■□□□□ 0.6
APEX1P27695 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APEX1P27695 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APEX1P27695 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
APEX1P27695 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APEX1P27695 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
APEX1P27695 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.81■□□□□ 0.6
APEX1P27695 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
APEX1P27695 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APEX1P27695 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.8■□□□□ 0.6
APEX1P27695 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.8■□□□□ 0.6
APEX1P27695 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
APEX1P27695 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.8■□□□□ 0.6
APEX1P27695 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
APEX1P27695 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
APEX1P27695 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
APEX1P27695 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APEX1P27695 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.79■□□□□ 0.6
APEX1P27695 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
APEX1P27695 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.79■□□□□ 0.6
APEX1P27695 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
APEX1P27695 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
APEX1P27695 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APEX1P27695 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms