Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TNFRSF1BP20333 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 PCDHAC2-203ENST00000615316 3011 ntBASIC19.44■□□□□ 0.7
TNFRSF1BP20333 AC073314.1-201ENST00000568729 2216 ntBASIC19.44■□□□□ 0.7
TNFRSF1BP20333 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TNFRSF1BP20333 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 AC006128.1-201ENST00000624704 1661 ntBASIC19.43■□□□□ 0.7
TNFRSF1BP20333 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 UNC93B3-201ENST00000308076 687 ntBASIC19.43■□□□□ 0.7
TNFRSF1BP20333 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 BX842568.3-201ENST00000418104 571 ntBASIC19.43■□□□□ 0.7
TNFRSF1BP20333 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 AC133561.4-201ENST00000566112 224 ntBASIC19.43■□□□□ 0.7
TNFRSF1BP20333 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
TNFRSF1BP20333 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.42■□□□□ 0.7
TNFRSF1BP20333 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 AC024257.2-201ENST00000549699 147 ntBASIC19.41■□□□□ 0.7
TNFRSF1BP20333 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TNFRSF1BP20333 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.4■□□□□ 0.7
TNFRSF1BP20333 AC126544.1-201ENST00000580842 1059 ntBASIC19.4■□□□□ 0.7
TNFRSF1BP20333 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms