Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
ATF1P18846 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
ATF1P18846 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.37■□□□□ 0.53
ATF1P18846 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
ATF1P18846 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATF1P18846 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATF1P18846 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.36■□□□□ 0.53
ATF1P18846 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.36■□□□□ 0.53
ATF1P18846 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 SLC47A1P1-202ENST00000449666 945 ntBASIC18.36■□□□□ 0.53
ATF1P18846 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATF1P18846 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.36■□□□□ 0.53
ATF1P18846 AC131281.2-201ENST00000520478 145 ntBASIC18.36■□□□□ 0.53
ATF1P18846 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.36■□□□□ 0.53
ATF1P18846 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.36■□□□□ 0.53
ATF1P18846 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
ATF1P18846 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATF1P18846 PCDHAC2-203ENST00000615316 3011 ntBASIC18.36■□□□□ 0.53
ATF1P18846 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.35■□□□□ 0.53
ATF1P18846 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATF1P18846 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 AFG3L1P-217ENST00000557444 2447 ntBASIC18.35■□□□□ 0.53
ATF1P18846 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
ATF1P18846 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ATF1P18846 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATF1P18846 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
ATF1P18846 AP004607.7-201ENST00000527152 1677 ntBASIC18.34■□□□□ 0.53
ATF1P18846 AC006128.1-201ENST00000624704 1661 ntBASIC18.34■□□□□ 0.53
ATF1P18846 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.34■□□□□ 0.53
ATF1P18846 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.34■□□□□ 0.53
ATF1P18846 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.34■□□□□ 0.53
ATF1P18846 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATF1P18846 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATF1P18846 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATF1P18846 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.34■□□□□ 0.53
ATF1P18846 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.34■□□□□ 0.53
ATF1P18846 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.34■□□□□ 0.53
ATF1P18846 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATF1P18846 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATF1P18846 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.33■□□□□ 0.53
ATF1P18846 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATF1P18846 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATF1P18846 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATF1P18846 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATF1P18846 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
ATF1P18846 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.33■□□□□ 0.52
ATF1P18846 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.33■□□□□ 0.52
ATF1P18846 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF1P18846 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.33■□□□□ 0.52
ATF1P18846 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF1P18846 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ATF1P18846 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATF1P18846 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.33■□□□□ 0.52
ATF1P18846 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF1P18846 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATF1P18846 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATF1P18846 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms