Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PSMC3P17980 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PSMC3P17980 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PSMC3P17980 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.85■■□□□ 1.09
PSMC3P17980 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.85■■□□□ 1.09
PSMC3P17980 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.84■■□□□ 1.09
PSMC3P17980 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PSMC3P17980 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSMC3P17980 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.84■■□□□ 1.09
PSMC3P17980 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSMC3P17980 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.84■■□□□ 1.09
PSMC3P17980 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PSMC3P17980 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.84■■□□□ 1.09
PSMC3P17980 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.84■■□□□ 1.09
PSMC3P17980 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.84■■□□□ 1.09
PSMC3P17980 AL162412.1-201ENST00000567129 965 ntBASIC21.84■■□□□ 1.09
PSMC3P17980 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.84■■□□□ 1.09
PSMC3P17980 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
PSMC3P17980 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.84■■□□□ 1.09
PSMC3P17980 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.84■■□□□ 1.09
PSMC3P17980 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSMC3P17980 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PSMC3P17980 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PSMC3P17980 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 AC087742.1-201ENST00000575880 1738 ntBASIC21.83■■□□□ 1.09
PSMC3P17980 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PSMC3P17980 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.83■■□□□ 1.09
PSMC3P17980 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.83■■□□□ 1.09
PSMC3P17980 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.83■■□□□ 1.09
PSMC3P17980 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.83■■□□□ 1.09
PSMC3P17980 AC093827.2-201ENST00000512654 315 ntBASIC21.83■■□□□ 1.09
PSMC3P17980 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.83■■□□□ 1.09
PSMC3P17980 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.83■■□□□ 1.09
PSMC3P17980 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.83■■□□□ 1.09
PSMC3P17980 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.83■■□□□ 1.09
PSMC3P17980 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PSMC3P17980 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PSMC3P17980 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PSMC3P17980 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PSMC3P17980 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
PSMC3P17980 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.82■■□□□ 1.08
PSMC3P17980 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PSMC3P17980 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
PSMC3P17980 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 AC097658.1-201ENST00000475555 843 ntBASIC21.82■■□□□ 1.08
PSMC3P17980 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.82■■□□□ 1.08
PSMC3P17980 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PSMC3P17980 AL591742.1-201ENST00000604433 565 ntBASIC21.82■■□□□ 1.08
PSMC3P17980 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PSMC3P17980 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
PSMC3P17980 RBM17P2-201ENST00000616397 1405 ntBASIC21.81■■□□□ 1.08
PSMC3P17980 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PSMC3P17980 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PSMC3P17980 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PSMC3P17980 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PSMC3P17980 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PSMC3P17980 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.81■■□□□ 1.08
PSMC3P17980 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PSMC3P17980 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.81■■□□□ 1.08
PSMC3P17980 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PSMC3P17980 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.81■■□□□ 1.08
PSMC3P17980 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PSMC3P17980 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.8■■□□□ 1.08
PSMC3P17980 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.8■■□□□ 1.08
PSMC3P17980 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.8■■□□□ 1.08
PSMC3P17980 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.8■■□□□ 1.08
PSMC3P17980 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 AC083880.1-201ENST00000608266 535 ntBASIC21.8■■□□□ 1.08
PSMC3P17980 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.8■■□□□ 1.08
PSMC3P17980 MYC-209ENST00000641252 345 ntBASIC21.8■■□□□ 1.08
PSMC3P17980 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PSMC3P17980 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms