Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SP9P0CG40 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SP9P0CG40 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SP9P0CG40 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.94■□□□□ 0.94
SP9P0CG40 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.94■□□□□ 0.94
SP9P0CG40 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SP9P0CG40 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.93■□□□□ 0.94
SP9P0CG40 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SP9P0CG40 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SP9P0CG40 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 TMPOP1-202ENST00000424642 1267 ntBASIC20.93■□□□□ 0.94
SP9P0CG40 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.93■□□□□ 0.94
SP9P0CG40 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.93■□□□□ 0.94
SP9P0CG40 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.93■□□□□ 0.94
SP9P0CG40 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
SP9P0CG40 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SP9P0CG40 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.93■□□□□ 0.94
SP9P0CG40 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.93■□□□□ 0.94
SP9P0CG40 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SP9P0CG40 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.92■□□□□ 0.94
SP9P0CG40 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SP9P0CG40 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 ARMC10P1-201ENST00000313754 855 ntBASIC20.92■□□□□ 0.94
SP9P0CG40 KRT18P68-201ENST00000392293 1000 ntBASIC20.92■□□□□ 0.94
SP9P0CG40 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.92■□□□□ 0.94
SP9P0CG40 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SP9P0CG40 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SP9P0CG40 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.92■□□□□ 0.94
SP9P0CG40 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SP9P0CG40 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.92■□□□□ 0.94
SP9P0CG40 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SP9P0CG40 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SP9P0CG40 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SP9P0CG40 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SP9P0CG40 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.91■□□□□ 0.94
SP9P0CG40 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SP9P0CG40 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SP9P0CG40 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SP9P0CG40 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SP9P0CG40 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.91■□□□□ 0.94
SP9P0CG40 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.91■□□□□ 0.94
SP9P0CG40 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.91■□□□□ 0.94
SP9P0CG40 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SP9P0CG40 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SP9P0CG40 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SP9P0CG40 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SP9P0CG40 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SP9P0CG40 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SP9P0CG40 AL135905.2-201ENST00000584934 1404 ntBASIC20.9■□□□□ 0.94
SP9P0CG40 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SP9P0CG40 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.9■□□□□ 0.94
SP9P0CG40 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.9■□□□□ 0.94
SP9P0CG40 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.9■□□□□ 0.94
SP9P0CG40 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.9■□□□□ 0.94
SP9P0CG40 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SP9P0CG40 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SP9P0CG40 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.9■□□□□ 0.94
SP9P0CG40 CD177P1-201ENST00000606252 935 ntBASIC20.9■□□□□ 0.94
SP9P0CG40 AC124016.1-201ENST00000609552 612 ntBASIC20.9■□□□□ 0.94
SP9P0CG40 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
SP9P0CG40 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.89■□□□□ 0.94
SP9P0CG40 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SP9P0CG40 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SP9P0CG40 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SP9P0CG40 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.89■□□□□ 0.93
SP9P0CG40 AC133681.1-201ENST00000465482 601 ntBASIC20.89■□□□□ 0.93
SP9P0CG40 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.89■□□□□ 0.93
SP9P0CG40 AL355075.4-201ENST00000554988 638 ntBASIC20.89■□□□□ 0.93
SP9P0CG40 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SP9P0CG40 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.89■□□□□ 0.93
SP9P0CG40 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SP9P0CG40 MTDHP1-201ENST00000605323 784 ntBASIC20.89■□□□□ 0.93
SP9P0CG40 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.89■□□□□ 0.93
SP9P0CG40 AC113410.3-201ENST00000623366 203 ntBASIC20.89■□□□□ 0.93
SP9P0CG40 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.89■□□□□ 0.93
SP9P0CG40 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SP9P0CG40 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SP9P0CG40 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.88■□□□□ 0.93
SP9P0CG40 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SP9P0CG40 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms