Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
RB1P06400 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.33■■□□□ 1.17
RB1P06400 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RB1P06400 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.33■■□□□ 1.17
RB1P06400 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC22.33■■□□□ 1.17
RB1P06400 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
RB1P06400 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
RB1P06400 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RB1P06400 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.16
RB1P06400 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 AC139530.1-201ENST00000575312 1977 ntBASIC22.32■■□□□ 1.16
RB1P06400 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.32■■□□□ 1.16
RB1P06400 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
RB1P06400 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.32■■□□□ 1.16
RB1P06400 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.32■■□□□ 1.16
RB1P06400 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
RB1P06400 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
RB1P06400 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 AC092368.3-202ENST00000574180 1591 ntBASIC22.31■■□□□ 1.16
RB1P06400 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.31■■□□□ 1.16
RB1P06400 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.31■■□□□ 1.16
RB1P06400 KRT18P68-201ENST00000392293 1000 ntBASIC22.31■■□□□ 1.16
RB1P06400 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RB1P06400 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RB1P06400 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RB1P06400 AC003102.1-202ENST00000563394 1796 ntBASIC22.3■■□□□ 1.16
RB1P06400 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.3■■□□□ 1.16
RB1P06400 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RB1P06400 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
RB1P06400 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RB1P06400 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.3■■□□□ 1.16
RB1P06400 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
RB1P06400 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.3■■□□□ 1.16
RB1P06400 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RB1P06400 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
RB1P06400 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RB1P06400 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.3■■□□□ 1.16
RB1P06400 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.3■■□□□ 1.16
RB1P06400 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
RB1P06400 Z99916.2-201ENST00000604037 246 ntBASIC22.3■■□□□ 1.16
RB1P06400 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.3■■□□□ 1.16
RB1P06400 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RB1P06400 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
RB1P06400 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RB1P06400 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.29■■□□□ 1.16
RB1P06400 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.29■■□□□ 1.16
RB1P06400 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.29■■□□□ 1.16
RB1P06400 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.29■■□□□ 1.16
RB1P06400 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.29■■□□□ 1.16
RB1P06400 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.29■■□□□ 1.16
RB1P06400 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.29■■□□□ 1.16
RB1P06400 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RB1P06400 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RB1P06400 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RB1P06400 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.28■■□□□ 1.16
RB1P06400 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RB1P06400 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
RB1P06400 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.28■■□□□ 1.16
RB1P06400 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.28■■□□□ 1.16
RB1P06400 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.28■■□□□ 1.16
RB1P06400 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.28■■□□□ 1.16
RB1P06400 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RB1P06400 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.28■■□□□ 1.16
RB1P06400 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms