Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.33■■□□□ 1.65
CHGBP05060 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHGBP05060 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CHGBP05060 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.32■■□□□ 1.64
CHGBP05060 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CHGBP05060 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.32■■□□□ 1.64
CHGBP05060 BID-214ENST00000617586 542 ntTSL 5 BASIC25.32■■□□□ 1.64
CHGBP05060 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.32■■□□□ 1.64
CHGBP05060 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.32■■□□□ 1.64
CHGBP05060 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CHGBP05060 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.31■■□□□ 1.64
CHGBP05060 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHGBP05060 AL024507.2-201ENST00000606070 2574 ntBASIC25.31■■□□□ 1.64
CHGBP05060 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHGBP05060 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHGBP05060 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.31■■□□□ 1.64
CHGBP05060 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.31■■□□□ 1.64
CHGBP05060 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC25.31■■□□□ 1.64
CHGBP05060 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHGBP05060 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
CHGBP05060 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CHGBP05060 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHGBP05060 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHGBP05060 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHGBP05060 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
CHGBP05060 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHGBP05060 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.3■■□□□ 1.64
CHGBP05060 CNN2P6-201ENST00000439038 900 ntBASIC25.3■■□□□ 1.64
CHGBP05060 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC25.3■■□□□ 1.64
CHGBP05060 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.3■■□□□ 1.64
CHGBP05060 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC25.3■■□□□ 1.64
CHGBP05060 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHGBP05060 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.3■■□□□ 1.64
CHGBP05060 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CHGBP05060 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.3■■□□□ 1.64
CHGBP05060 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC25.3■■□□□ 1.64
CHGBP05060 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
CHGBP05060 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.29■■□□□ 1.64
CHGBP05060 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC25.29■■□□□ 1.64
CHGBP05060 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHGBP05060 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.29■■□□□ 1.64
CHGBP05060 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.29■■□□□ 1.64
CHGBP05060 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CHGBP05060 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.29■■□□□ 1.64
CHGBP05060 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.29■■□□□ 1.64
CHGBP05060 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.29■■□□□ 1.64
CHGBP05060 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.29■■□□□ 1.64
CHGBP05060 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHGBP05060 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CHGBP05060 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.28■■□□□ 1.64
CHGBP05060 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CHGBP05060 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHGBP05060 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHGBP05060 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHGBP05060 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CHGBP05060 KRT18P20-201ENST00000548986 1279 ntBASIC25.28■■□□□ 1.64
CHGBP05060 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.28■■□□□ 1.64
CHGBP05060 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CHGBP05060 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHGBP05060 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
CHGBP05060 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
CHGBP05060 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHGBP05060 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHGBP05060 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CHGBP05060 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.27■■□□□ 1.64
CHGBP05060 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHGBP05060 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 CROCCP5-201ENST00000436658 830 ntBASIC25.27■■□□□ 1.64
CHGBP05060 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.27■■□□□ 1.64
CHGBP05060 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHGBP05060 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CHGBP05060 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
CHGBP05060 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHGBP05060 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHGBP05060 AL137060.1-201ENST00000618151 2648 ntBASIC25.26■■□□□ 1.63
CHGBP05060 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHGBP05060 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
CHGBP05060 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHGBP05060 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.26■■□□□ 1.63
CHGBP05060 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHGBP05060 AC008175.2-201ENST00000612840 297 ntBASIC25.26■■□□□ 1.63
CHGBP05060 AC010536.3-201ENST00000620306 533 ntBASIC25.26■■□□□ 1.63
CHGBP05060 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHGBP05060 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.26■■□□□ 1.63
CHGBP05060 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHGBP05060 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC25.26■■□□□ 1.63
CHGBP05060 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHGBP05060 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHGBP05060 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms