Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.94■□□□□ 0.14
TCRAP04437 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TCRAP04437 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TCRAP04437 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TCRAP04437 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TCRAP04437 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 MIR3181-201ENST00000578512 73 ntBASIC15.93■□□□□ 0.14
TCRAP04437 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.93■□□□□ 0.14
TCRAP04437 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
TCRAP04437 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TCRAP04437 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC15.93■□□□□ 0.14
TCRAP04437 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRAP04437 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRAP04437 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TCRAP04437 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.92■□□□□ 0.14
TCRAP04437 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TCRAP04437 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC15.92■□□□□ 0.14
TCRAP04437 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.92■□□□□ 0.14
TCRAP04437 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.92■□□□□ 0.14
TCRAP04437 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TCRAP04437 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TCRAP04437 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRAP04437 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.91■□□□□ 0.14
TCRAP04437 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRAP04437 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TCRAP04437 AK3-203ENST00000447596 705 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRAP04437 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.91■□□□□ 0.14
TCRAP04437 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.91■□□□□ 0.14
TCRAP04437 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TCRAP04437 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TCRAP04437 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
TCRAP04437 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRAP04437 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRAP04437 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRAP04437 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRAP04437 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRAP04437 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRAP04437 AP006587.3-201ENST00000525742 1516 ntBASIC15.9■□□□□ 0.14
TCRAP04437 AL391422.3-201ENST00000603791 2761 ntBASIC15.9■□□□□ 0.14
TCRAP04437 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
TCRAP04437 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TCRAP04437 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TCRAP04437 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRAP04437 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRAP04437 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRAP04437 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRAP04437 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRAP04437 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.9■□□□□ 0.14
TCRAP04437 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TCRAP04437 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.9■□□□□ 0.14
TCRAP04437 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.9■□□□□ 0.14
TCRAP04437 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TCRAP04437 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
TCRAP04437 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
TCRAP04437 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRAP04437 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRAP04437 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRAP04437 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRAP04437 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.89■□□□□ 0.13
TCRAP04437 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TCRAP04437 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TCRAP04437 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TCRAP04437 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRAP04437 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TCRAP04437 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
TCRAP04437 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms