Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
MT-ND1P03886 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.71■□□□□ 0.75
MT-ND1P03886 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
MT-ND1P03886 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MT-ND1P03886 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.71■□□□□ 0.75
MT-ND1P03886 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.71■□□□□ 0.75
MT-ND1P03886 MIR3181-201ENST00000578512 73 ntBASIC19.71■□□□□ 0.75
MT-ND1P03886 AL512631.2-201ENST00000604634 923 ntBASIC19.71■□□□□ 0.75
MT-ND1P03886 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MT-ND1P03886 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 GABARAPL3-202ENST00000624044 1851 ntBASIC19.71■□□□□ 0.75
MT-ND1P03886 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND1P03886 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-ND1P03886 PLK5-205ENST00000642079 1969 ntBASIC19.7■□□□□ 0.74
MT-ND1P03886 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-ND1P03886 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-ND1P03886 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MT-ND1P03886 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
MT-ND1P03886 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MT-ND1P03886 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND1P03886 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.7■□□□□ 0.74
MT-ND1P03886 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MT-ND1P03886 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-ND1P03886 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-ND1P03886 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-ND1P03886 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-ND1P03886 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
MT-ND1P03886 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND1P03886 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-ND1P03886 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-ND1P03886 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.69■□□□□ 0.74
MT-ND1P03886 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND1P03886 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
MT-ND1P03886 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
MT-ND1P03886 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND1P03886 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
MT-ND1P03886 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
MT-ND1P03886 AC006128.1-201ENST00000624704 1661 ntBASIC19.68■□□□□ 0.74
MT-ND1P03886 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.68■□□□□ 0.74
MT-ND1P03886 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.68■□□□□ 0.74
MT-ND1P03886 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
MT-ND1P03886 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.68■□□□□ 0.74
MT-ND1P03886 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 AL356441.2-201ENST00000443009 864 ntBASIC19.68■□□□□ 0.74
MT-ND1P03886 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.68■□□□□ 0.74
MT-ND1P03886 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
MT-ND1P03886 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND1P03886 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MT-ND1P03886 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MT-ND1P03886 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-ND1P03886 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-ND1P03886 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.67■□□□□ 0.74
MT-ND1P03886 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
MT-ND1P03886 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.67■□□□□ 0.74
MT-ND1P03886 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MT-ND1P03886 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-ND1P03886 AC068587.7-201ENST00000641602 218 ntBASIC19.67■□□□□ 0.74
MT-ND1P03886 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND1P03886 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms