Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HERC2O95714 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.25□□□□□ -0.29
HERC2O95714 AC027702.1-201ENST00000563810 1770 ntBASIC13.25□□□□□ -0.29
HERC2O95714 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HERC2O95714 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HERC2O95714 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HERC2O95714 AC128688.1-201ENST00000487626 519 ntBASIC13.25□□□□□ -0.29
HERC2O95714 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC13.25□□□□□ -0.29
HERC2O95714 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HERC2O95714 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HERC2O95714 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC13.24□□□□□ -0.29
HERC2O95714 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.24□□□□□ -0.29
HERC2O95714 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HERC2O95714 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HERC2O95714 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HERC2O95714 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.24□□□□□ -0.29
HERC2O95714 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.24□□□□□ -0.29
HERC2O95714 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.24□□□□□ -0.29
HERC2O95714 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.24□□□□□ -0.29
HERC2O95714 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC13.24□□□□□ -0.29
HERC2O95714 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.24□□□□□ -0.29
HERC2O95714 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HERC2O95714 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.24□□□□□ -0.29
HERC2O95714 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HERC2O95714 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
HERC2O95714 KRT8P45-201ENST00000414328 1447 ntBASIC13.24□□□□□ -0.29
HERC2O95714 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.24□□□□□ -0.29
HERC2O95714 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.24□□□□□ -0.29
HERC2O95714 AC010203.1-204ENST00000548782 407 ntBASIC13.24□□□□□ -0.29
HERC2O95714 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.23□□□□□ -0.29
HERC2O95714 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.23□□□□□ -0.29
HERC2O95714 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC13.23□□□□□ -0.29
HERC2O95714 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC13.23□□□□□ -0.29
HERC2O95714 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.23□□□□□ -0.29
HERC2O95714 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.23□□□□□ -0.29
HERC2O95714 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.23□□□□□ -0.29
HERC2O95714 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.23□□□□□ -0.29
HERC2O95714 NAPSB-206ENST00000562112 1266 ntBASIC13.23□□□□□ -0.29
HERC2O95714 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC13.23□□□□□ -0.29
HERC2O95714 SLC6A10P-202ENST00000431994 2058 ntBASIC13.23□□□□□ -0.29
HERC2O95714 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
HERC2O95714 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HERC2O95714 AC092803.2-201ENST00000564287 1899 ntBASIC13.22□□□□□ -0.29
HERC2O95714 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HERC2O95714 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HERC2O95714 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.22□□□□□ -0.29
HERC2O95714 KRT17P6-201ENST00000453795 1220 ntBASIC13.22□□□□□ -0.29
HERC2O95714 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.22□□□□□ -0.29
HERC2O95714 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HERC2O95714 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.22□□□□□ -0.29
HERC2O95714 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HERC2O95714 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HERC2O95714 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HERC2O95714 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HERC2O95714 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC13.22□□□□□ -0.29
HERC2O95714 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC13.22□□□□□ -0.29
HERC2O95714 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.22□□□□□ -0.29
HERC2O95714 AL359075.1-203ENST00000462729 1002 ntBASIC13.22□□□□□ -0.29
HERC2O95714 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
HERC2O95714 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.22□□□□□ -0.29
HERC2O95714 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC13.21□□□□□ -0.29
HERC2O95714 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.21□□□□□ -0.29
HERC2O95714 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HERC2O95714 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HERC2O95714 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HERC2O95714 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HERC2O95714 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HERC2O95714 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.21□□□□□ -0.29
HERC2O95714 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
HERC2O95714 CABP2-204ENST00000636477 941 ntTSL 5 BASIC13.21□□□□□ -0.29
HERC2O95714 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HERC2O95714 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.21□□□□□ -0.29
HERC2O95714 AC063952.2-201ENST00000498792 1227 ntBASIC13.21□□□□□ -0.29
HERC2O95714 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.21□□□□□ -0.29
HERC2O95714 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.21□□□□□ -0.29
HERC2O95714 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HERC2O95714 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
HERC2O95714 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
HERC2O95714 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HERC2O95714 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HERC2O95714 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.21□□□□□ -0.3
HERC2O95714 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HERC2O95714 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
HERC2O95714 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms